RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 PPDPFLQ8WWR9 84 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 TMEM158Q8WZ71 300 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 REV3LO60673 3130 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 FAM90A9PA6NNJ1 464 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 TIMM23O14925 209 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 TRAV41A0A0B4J266 112 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 C1orf53Q5VUE5 145 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 PPP1R32Q7Z5V6 425 aa9.36□□□□□ -0.91
U2AF1-209ENST00000475639 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
U2AF1-209ENST00000475639 IGHV3-73A0A0B4J1V6 119 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 TRAV25A0A0B4J276 109 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 IGHV3-53P01767 116 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 VWC2Q2TAL6 325 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 NKAPP1Q8N9T2 125 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 SAP25Q8TEE9 199 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 CRYGSP22914 178 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 C14orf178Q8N769 122 aaPredicted RBP9.35□□□□□ -0.91
U2AF1-209ENST00000475639 COL8A2P25067 703 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 ETDBQ3ZM63 59 aa9.35□□□□□ -0.91
U2AF1-209ENST00000475639 SP9P0CG40 484 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 C15orf32Q32M92 178 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
U2AF1-209ENST00000475639 LRP4O75096 1905 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 IGKV2-40A0A087WW87 121 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-209ENST00000475639 IGKV2D-40P01614 121 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-209ENST00000475639 ZNF837Q96EG3 531 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-209ENST00000475639 C1orf43Q9BWL3 253 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 CCDC168Q8NDH2 2452 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 FAM231BA6NCW3 169 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 RHODO00212 210 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 C5orf67F2Z3F1 127 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 EGR2P11161 476 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-209ENST00000475639 ATP1A1-AS1Q5TC04 95 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 TREML4Q6UXN2 200 aa9.34□□□□□ -0.91
U2AF1-209ENST00000475639 LINC00527Q9UJ94 153 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 OOSP1A8MZH6 123 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 RFPL3SP0C7P2 107 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 FOXE3Q13461 319 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 TAL2Q16559 108 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 NSUN5P1Q3KNT7 163 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 SPACA3Q8IXA5 215 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 CLPSL1A2RUU4 121 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 C22orf46C9J442 243 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 EXOC3-AS1Q8N2X6 119 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 RPUSD1Q9UJJ7 312 aaKnown RBP9.33□□□□□ -0.92
U2AF1-209ENST00000475639 LY96Q9Y6Y9 160 aa9.33□□□□□ -0.92
U2AF1-209ENST00000475639 hADV29S1A0JD25 119 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 TRAV40A0A0B4J280 105 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.32□□□□□ -0.92
U2AF1-209ENST00000475639 SLC22A18ASQ8N1D0 253 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 SMIM2Q9BVW6 85 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 MORN5Q5VZ52 161 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 LYPD1Q8N2G4 141 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 PCDH15Q96QU1 1955 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 FCN3O75636 299 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 AZU1P20160 251 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 C11orf52Q96A22 123 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 SCRT2Q9NQ03 307 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 PRDM6Q9NQX0 595 aa9.32□□□□□ -0.92
U2AF1-209ENST00000475639 CGB7P0DN87 165 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 IFITM1P13164 125 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 RNF5Q99942 180 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 PFN2P35080 140 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 NBL1P41271 181 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 FAM120AOSQ5T036 256 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 MBNL3Q9NUK0 354 aaKnown RBP9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GPR179Q6PRD1 2367 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 MED12LQ86YW9 2145 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 TRAV12-1A0A0B4J245 112 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 DEFB104AQ8WTQ1 72 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 UBE2E2Q96LR5 201 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 TRGV9Q99603 122 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 KMT2EQ8IZD2 1858 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE12JA6NER3 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
U2AF1-209ENST00000475639 CRLF1O75462 422 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE7O76087 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE12FP0CL80 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE12GP0CL81 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE12IP0CL82 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE4Q13068 117 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 C10orf55Q5SWW7 151 aa9.31□□□□□ -0.92
U2AF1-209ENST00000475639 SPTBN5Q9NRC6 3674 aaKnown RBP9.3□□□□□ -0.92
U2AF1-209ENST00000475639 FXYD7P58549 80 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE5Q13069 117 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 GAGE6Q13070 117 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 ZNF497Q6ZNH5 498 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 THBDP07204 575 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 RPL35AP18077 110 aaKnown RBP9.3□□□□□ -0.92
U2AF1-209ENST00000475639 IGHV1-2P23083 117 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 URB1-AS1Q96HZ7 61 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 FGF23Q9GZV9 251 aaPredicted RBP9.3□□□□□ -0.92
U2AF1-209ENST00000475639 CHCHD2Q9Y6H1 151 aaPredicted RBP9.3□□□□□ -0.92
U2AF1-209ENST00000475639 SMIM27A0A1W2PRY6 76 aa9.3□□□□□ -0.92
U2AF1-209ENST00000475639 NUP35Q8NFH5 326 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms