RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ZNF688P0C7X2 276 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 NPC2P61916 151 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF555Q8NEP9 628 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 TOMM6Q96B49 74 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 CCL13Q99616 98 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 GOLGA2P5Q9HBQ8 144 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 CCDC88CQ9P219 2028 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 FXYD6-FXYD2A0A087WZ82 144 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 C9JQL5 133 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 SYS1-DBNDD2H3BUS1 97 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 M0R378 163 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF73O43830 326 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 IL3RAP26951 378 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF322Q6U7Q0 402 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 CMTM2Q8TAZ6 248 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 FAM3DQ96BQ1 224 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 TMEM204Q9BSN7 226 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 FXYD6Q9H0Q3 95 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 CEP192Q8TEP8 1941 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 GREB1LQ9C091 1923 aaPredicted RBP4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 SHANK1Q9Y566 2161 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 DOCK6Q96HP0 2047 aa4.64□□□□□ -1.67
SMARCE1-208ENST00000474246 TRBV7-7A0A0K0K1E9 115 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 NAP1L6A6NFF2 107 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 ZFP92A6NM28 416 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 A8MWL6 223 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 COX6A1P12074 109 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 CDK5R1Q15078 307 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 LINC00242Q5T6M2 205 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 LCA10Q71F78 164 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 RITA1Q96K30 269 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 TNFRSF19Q9NS68 423 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 SPRR3Q9UBC9 169 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 XCL2Q9UBD3 114 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF835Q9Y2P0 537 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 LCTP09848 1927 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 A0A0J9YXV3 536 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 TRBV27A0A0K0K1C4 114 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 IL5P05113 134 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 WFDC2Q14508 124 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 C6orf99Q4VX62 202 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 NEXN-AS1Q8NBZ9 246 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 ATXN7L3BQ96GX2 97 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 POLR2J2Q9GZM3 115 aaKnown RBP4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 SIX2Q9NPC8 291 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 KLK5Q9Y337 293 aaPredicted RBP4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 INSL5Q9Y5Q6 135 aa4.63□□□□□ -1.67
SMARCE1-208ENST00000474246 PKDREJQ9NTG1 2253 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 IGLL5B9A064 214 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF253O75346 499 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF737O75373 536 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 FSTL3O95633 263 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 VDAC1P21796 283 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 MFAP2P55001 183 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 SNRPD3P62318 126 aaKnown RBP4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 HBBP68871 147 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 FBXL19-AS1Q494R0 122 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 WDR38Q5JTN6 314 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 LINC00596Q86U02 117 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 SIGLECL1Q8N7X8 197 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 C3orf56Q8N813 242 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 OR5C1Q8NGR4 320 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 OR5H2Q8NGV7 314 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF581Q9P0T4 197 aa4.62□□□□□ -1.67
SMARCE1-208ENST00000474246 ANK1P16157 1881 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 IGHV3-9P01782 118 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 GNB2P62879 340 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 C11orf71Q6IPW1 123 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 PHF5AQ7RTV0 110 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 Q8N976 141 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 APCDD1LQ8NCL9 501 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 OR10G2Q8NGC3 310 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 OR8A1Q8NGG7 326 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 FAM213BQ8TBF2 198 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 CHCHD10Q8WYQ3 142 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 DSCR8Q96T75 97 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 PLEKHF2Q9H8W4 249 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 PTPRDP23468 1912 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 A0A0G2JRQ6 117 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 A0A1W2PNU3 283 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 COX7A2LO14548 114 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 CREBL2O60519 120 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 PI3P19957 117 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 MORN5Q5VZ52 161 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 LGALS9CQ6DKI2 356 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 ZNF329Q86UD4 541 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 C6orf223Q8N319 242 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 C15orf53Q8NAA6 179 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 MYOZ3Q8TDC0 251 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 ITLN2Q8WWU7 325 aaPredicted RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 TIMM17AQ99595 171 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 FGFBP2Q9BYJ0 223 aa4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 LSM2Q9Y333 95 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 F11RQ9Y624 299 aaKnown RBP4.61□□□□□ -1.67
SMARCE1-208ENST00000474246 ATP6V0E1O15342 81 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 PPP1R3DO95685 299 aa4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 FAUP35544 74 aaKnown RBP4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 NCBP2P52298 156 aaKnown RBP eCLIP4.6□□□□□ -1.67
SMARCE1-208ENST00000474246 LINC00313P59037 77 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms