RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 OR5AL1P0C617 328 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 BTF3P20290 206 aaKnown RBP4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 GATA3P23771 443 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 GPR183P32249 361 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 UQCRFS1P47985 274 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 ATP5J2P56134 94 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 LMO4P61968 165 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 CD300EQ496F6 205 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 LDLRAD2Q5SZI1 272 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 Q6ZWC4 215 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 TCF24Q7RTU0 167 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 KIR2DL5AQ8N109 375 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 DYNAPQ8N1N2 210 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 ZNF664Q8N3J9 261 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 ZNF502Q8TBZ5 544 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 C18orf32Q8TCD1 76 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 C20orf144Q9BQM9 153 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 ALKBH7Q9BT30 221 aaPredicted RBP4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 TPPP3Q9BW30 176 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 HSPB8Q9UJY1 196 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 S4R3C0 116 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 COL12A1Q99715 3063 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 ROS1P08922 2347 aa4.57□□□□□ -1.68
ATPAF1-204ENST00000474020 C2CD3Q4AC94 2353 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 PCNX1Q96RV3 2341 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 A0A087X0K7 114 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 LOC102724200A0A096LPH7 203 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 TRAV8-1A0A0A6YYK1 113 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 A0A1B0GUS0 222 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 RBAKDNA6NC62 111 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 IGHV4-39P01824 125 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 PLA2G2AP14555 144 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 FOXA3P55318 350 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 NDPQ00604 133 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 SLAQ13239 276 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 KLK9Q2XQG4 91 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 ASPHD1Q5U4P2 390 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 RUSC1-AS1Q66K80 236 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 ZNF705AQ6ZN79 300 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 FA2HQ7L5A8 372 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 SMIM15Q7Z3B0 74 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 C5orf56Q8N8D9 126 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 MRPL53Q96EL3 112 aaKnown RBP4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 ZC2HC1AQ96GY0 325 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 C14orf144Q96I85 54 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 USMG5Q96IX5 58 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 MIEN1Q9BRT3 115 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 TMEM191AQ9H0A3 160 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 HIF1ANQ9NWT6 349 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 KLK9Q9UKQ9 250 aa4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 UBR5O95071 2799 aaPredicted RBP4.56□□□□□ -1.68
ATPAF1-204ENST00000474020 TRAV40A0A0B4J280 105 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 A0A0G2JLM5 398 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 SH2D7A6NKC9 451 aaPredicted RBP4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 FABP5P3A8MUU1 101 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 NUPR1O60356 82 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 SH2D1AO60880 128 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 NDUFS7O75251 213 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 TRGV3P03979 118 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 CLEC3BP05452 202 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 CTSGP08311 255 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 SLC25A16P16260 332 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 MALP21145 153 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 ARL3P36405 182 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 PAX8Q06710 450 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 FAM120AOSQ5T036 256 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 SAMD13Q5VXD3 122 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 CLEC19AQ6UXS0 136 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 FER1L6-AS1Q8NA97 138 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 C10orf105Q8TEF2 133 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 GTSF1Q8WW33 167 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 ASCL2Q99929 193 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 C2orf88Q9BSF0 95 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 TMEM70Q9BUB7 260 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 MAP1LC3CQ9BXW4 147 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 UQCR10Q9UDW1 63 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 ZMAT5Q9UDW3 170 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 TP53TG3Q9ULZ0 132 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 TLN1Q9Y490 2541 aaKnown RBP4.55□□□□□ -1.68
ATPAF1-204ENST00000474020 A0A1W2PPR1 153 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 B4DSR2 109 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 F2Z2F3 143 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 C19orf84I3L1E1 186 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 M0R3E3 92 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 MRPS12O15235 138 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 LEPROTL1O95214 131 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 PRB1P04280 392 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 MSMBP08118 114 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 LINC00614P0C842 121 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 COX6B1P14854 86 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 PAX1P15863 534 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 HNRNPA3P51991 378 aaKnown RBP4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 CRIP2P52943 208 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 SSTP61278 116 aa4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 HIST1H1AQ02539 215 aaPredicted RBP4.54□□□□□ -1.68
ATPAF1-204ENST00000474020 ODF1Q14990 250 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms