RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
DDX56-209ENST00000473924 NKX2-5P52952 324 aaPredicted RBP9□□□□□ -0.97
DDX56-209ENST00000473924 SUMO1P63165 101 aaKnown RBP9□□□□□ -0.97
DDX56-209ENST00000473924 ZNF705AQ6ZN79 300 aaPredicted RBP9□□□□□ -0.97
DDX56-209ENST00000473924 C9orf47Q6ZRZ4 202 aa9□□□□□ -0.97
DDX56-209ENST00000473924 C1orf158Q8N1D5 194 aa9□□□□□ -0.97
DDX56-209ENST00000473924 ODF3Q96PU9 254 aa9□□□□□ -0.97
DDX56-209ENST00000473924 VGLL1Q99990 258 aa9□□□□□ -0.97
DDX56-209ENST00000473924 IGHV4-28A0A0C4DH34 117 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 RBAKDNA6NC62 111 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 HBE1P02100 147 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 H2AFB1P0C5Y9 115 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 RAB5CP51148 216 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 ZNF138P52744 262 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 UBE2G2P60604 165 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 ARL6IP6Q8N6S5 226 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 Q8NAQ8 132 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 C5orf17Q8NAS9 161 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 IL17DQ8TAD2 202 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 MUC7Q8TAX7 377 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 NEU1Q99519 415 aa8.99□□□□□ -0.97
DDX56-209ENST00000473924 C11orf68Q9H3H3 251 aaKnown RBP8.99□□□□□ -0.97
DDX56-209ENST00000473924 A0A1B0GV50 99 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 A0A1W2PRE2 83 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 SMIM9A6NGZ8 99 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 K7EQM0 130 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 GNG5P63218 68 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 RRN3P1Q2M238 152 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 GOLT1AQ6ZVE7 132 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 TMEM256Q8N2U0 113 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 MBD3L1Q8WWY6 194 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 LINC01587Q99440 93 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 ZNF492Q9P255 531 aa8.98□□□□□ -0.97
DDX56-209ENST00000473924 SERTM2A0A1B0GWG4 89 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 GGTLC3B5MD39 225 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 TEX46H3BTG2 121 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 IFNA7P01567 189 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 GPX1P07203 203 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 RBMY1A1P0DJD3 496 aaKnown RBP8.97□□□□□ -0.97
DDX56-209ENST00000473924 RBMY1CP0DJD4 496 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 HTN1P15515 57 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 SULT1A2P50226 295 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 KIR3DS1Q14943 382 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 RBMY1FQ15415 496 aaKnown RBP8.97□□□□□ -0.97
DDX56-209ENST00000473924 GFI1BQ5VTD9 330 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 Q8TAT8 98 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 C20orf144Q9BQM9 153 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 NIPSNAP3BQ9BS92 247 aa8.97□□□□□ -0.97
DDX56-209ENST00000473924 NKX6-2Q9C056 277 aaPredicted RBP8.97□□□□□ -0.97
DDX56-209ENST00000473924 YTHDF2Q9Y5A9 579 aaKnown RBP8.97□□□□□ -0.97
DDX56-209ENST00000473924 HUWE1Q7Z6Z7 4374 aaKnown RBP8.97□□□□□ -0.97
DDX56-209ENST00000473924 TRAV12-3A0A0B4J271 114 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 LOC102723971A0A1B0GUV8 181 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 TMEM189A5PLL7 270 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 FAM74A7A6NL05 159 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 H7BYZ3 331 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 TCRAP04437 139 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 NMBP08949 121 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 RNASE4P34096 147 aaKnown RBP8.96□□□□□ -0.98
DDX56-209ENST00000473924 EMP1P54849 157 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 CST9LP1Q5W188 147 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 C11orf45Q8TAV5 145 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 FAM19A4Q96LR4 140 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 EPDR1Q9UM22 224 aa8.96□□□□□ -0.98
DDX56-209ENST00000473924 TRAV8-1A0A0A6YYK1 113 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 TRBV7-9A0A0J9YWB2 115 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 C7orf71A4D174 169 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 ZNF705GA8MUZ8 300 aaPredicted RBP8.95□□□□□ -0.98
DDX56-209ENST00000473924 KLLNB2CW77 178 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 C3orf84H3BNL1 204 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 CRISP2P16562 243 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 PPT1P50897 306 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 TAS2R60P59551 318 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 BTN1A1Q13410 526 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 ZFAND6Q6FIF0 208 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 CYB561D1Q8N8Q1 229 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 ATG101Q9BSB4 218 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 BOLA1Q9Y3E2 137 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 LENEPQ9Y5L5 61 aa8.95□□□□□ -0.98
DDX56-209ENST00000473924 CXorf65A6NEN9 183 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 PAGE4O60829 102 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 PMS2P11Q13670 270 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 ALKAL2Q6UX46 152 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 ZFAND2AQ8N6M9 145 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 SGK494Q96LW2 274 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 NDFIP1Q9BT67 221 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 ARL2-SNX15V9GYD0 113 aa8.94□□□□□ -0.98
DDX56-209ENST00000473924 F6UZH7 168 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 PEX7O00628 323 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 PRM2P04554 102 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 NANOS2P60321 138 aaKnown RBP8.93□□□□□ -0.98
DDX56-209ENST00000473924 FLI1Q01543 452 aaPredicted RBP8.93□□□□□ -0.98
DDX56-209ENST00000473924 HIST1H2BAQ96A08 127 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 PYGO2Q9BRQ0 406 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 TREM1Q9NP99 234 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 PSG8Q9UQ74 426 aa8.93□□□□□ -0.98
DDX56-209ENST00000473924 TRAV1-1A0A0B4J248 108 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 FBLL1A6NHQ2 334 aaKnown RBP8.92□□□□□ -0.98
DDX56-209ENST00000473924 RGS13O14921 159 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms