RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ADMP35318 185 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 GAGE1Q13065 139 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 GAGE4Q13068 117 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 GAGE5Q13069 117 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 GAGE13Q4V321 117 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 LSM4Q9Y4Z0 139 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 KIAA1549LQ6ZVL6 1849 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 CD5LO43866 347 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 C11orf68Q9H3H3 251 aaKnown RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 TRBV7-9A0A0J9YWB2 115 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 LBHQ53QV2 105 aaPredicted RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 THAP8Q8NA92 274 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 SPAG8Q99932 426 aaPredicted RBP9.67□□□□□ -0.86
IRF1-208ENST00000472045 SLC25A2Q9BXI2 301 aa9.67□□□□□ -0.86
IRF1-208ENST00000472045 IGHV4-31P0DP07 118 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 Q8N9W7 124 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 TMEM14CQ9P0S9 112 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 INAFM1C9JVW0 142 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 LMO4P61968 165 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 CSTL1Q9H114 145 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 CHTOPQ9Y3Y2 248 aaKnown RBP9.66□□□□□ -0.86
IRF1-208ENST00000472045 CEP350Q5VT06 3117 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 IGHV3-16A0A0C4DH30 117 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 MYCNOSP40205 109 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 LINC00479Q96M42 142 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 TEX43Q6ZNM6 134 aa9.66□□□□□ -0.86
IRF1-208ENST00000472045 A0A1B0GW64 132 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 A8MWV9 139 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 SERF1AO75920 110 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 SSBP2P81877 361 aaPredicted RBP9.65□□□□□ -0.86
IRF1-208ENST00000472045 DMRTA1Q5VZB9 504 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 AJUBAQ96IF1 538 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 EREGO14944 169 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 SS18Q15532 418 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 ZNF491Q8N8L2 437 aa9.65□□□□□ -0.86
IRF1-208ENST00000472045 TRPT1Q86TN4 253 aaKnown RBP9.65□□□□□ -0.87
IRF1-208ENST00000472045 SMIM12Q96EX1 92 aa9.65□□□□□ -0.87
IRF1-208ENST00000472045 CSPG4Q6UVK1 2322 aa9.65□□□□□ -0.87
IRF1-208ENST00000472045 DPM2O94777 84 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 SEC11AP67812 179 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 C8orf49Q96NF6 230 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 TMEM170AQ8WVE7 144 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 MYO18BQ8IUG5 2567 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 FABP2P12104 132 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 TNFRSF13BO14836 293 aaPredicted RBP9.64□□□□□ -0.87
IRF1-208ENST00000472045 APOMO95445 188 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 HAPLN4Q86UW8 402 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 NUP35Q8NFH5 326 aa9.64□□□□□ -0.87
IRF1-208ENST00000472045 ATRXP46100 2492 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 WIPF3A6NGB9 483 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 IGLV1-47P01700 117 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 LINC00158P58513 81 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 PRR31Q5SQ13 230 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 PIFOQ8TCI5 191 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 TRAV9-2A0A087WT02 112 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 RITA1Q96K30 269 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 DENND4AQ7Z401 1863 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 IGHV4OR15-8A0A075B7B6 117 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 A0A087WW49 117 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 CHCHD1Q96BP2 118 aaKnown RBP9.63□□□□□ -0.87
IRF1-208ENST00000472045 CITED2Q99967 270 aaPredicted RBP9.63□□□□□ -0.87
IRF1-208ENST00000472045 LOC102724200A0A096LPH7 203 aaPredicted RBP9.63□□□□□ -0.87
IRF1-208ENST00000472045 TRAV13-1A0A0B4J241 112 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 NIT1Q86X76 327 aa9.63□□□□□ -0.87
IRF1-208ENST00000472045 FNDC4Q9H6D8 234 aaPredicted RBP9.63□□□□□ -0.87
IRF1-208ENST00000472045 IGHV3-64A0A075B6Q5 118 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 RASL11AQ6T310 242 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 C22orf34Q6ZV56 151 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 IFI27L1Q96BM0 104 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 ALPK3Q96L96 1907 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 TRBV25-1A0A075B6N4 114 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 C10orf142B7Z368 130 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 SLC25A20O43772 301 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 CD300EQ496F6 205 aaPredicted RBP9.62□□□□□ -0.87
IRF1-208ENST00000472045 SPXQ9BT56 116 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
IRF1-208ENST00000472045 APRG1Q8IVJ8 170 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 PRR25Q96S07 402 aa9.62□□□□□ -0.87
IRF1-208ENST00000472045 PIEZO2Q9H5I5 2752 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 TMEM89A2RUT3 159 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 IGHG2P01859 326 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 C6orf226Q5I0X4 101 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 PCDH15Q96QU1 1955 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 A6NDX4 124 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 RASL10AQ92737 203 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 SLAQ13239 276 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 COL5A1-AS1Q5SY13 56 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 C4orf3Q8WVX3 66 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 RMI2Q96E14 147 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 PAX4O43316 350 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 SNAI2O43623 268 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 IGF2BP2-AS1Q96M15 143 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 TMEM242Q9NWH2 141 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 ZNF492Q9P255 531 aa9.61□□□□□ -0.87
IRF1-208ENST00000472045 AMN1Q8IY45 258 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms