RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 CT83Q5H943 113 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 C8orf86Q6ZUL3 223 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 SMPXQ9UHP9 88 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 M0QZ24 198 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 P01737 135 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
HSPG2-208ENST00000471322 C19orf71A6NCJ1 209 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 ADARB2-AS1A8MUL3 147 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 LGALS9O00182 355 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 CDX1P47902 265 aaPredicted RBP13.27□□□□□ -0.29
HSPG2-208ENST00000471322 COX19Q49B96 90 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 TM4SF20Q53R12 229 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 SAMD13Q5VXD3 122 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 COX8CQ7Z4L0 72 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 REC114Q7Z4M0 266 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 GBGT1Q8N5D6 347 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 OR4B1Q8NGF8 309 aa13.27□□□□□ -0.29
HSPG2-208ENST00000471322 CT45A10P0DMU9 189 aa13.26□□□□□ -0.29
HSPG2-208ENST00000471322 C18orf65Q6ZTR6 163 aa13.26□□□□□ -0.29
HSPG2-208ENST00000471322 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
HSPG2-208ENST00000471322 C16orf92Q96LL3 132 aa13.26□□□□□ -0.29
HSPG2-208ENST00000471322 RPP21Q9H633 154 aaKnown RBP13.26□□□□□ -0.29
HSPG2-208ENST00000471322 A8MWL6 223 aa13.25□□□□□ -0.29
HSPG2-208ENST00000471322 NDFIP1Q9BT67 221 aa13.25□□□□□ -0.29
HSPG2-208ENST00000471322 IGKV2-40A0A087WW87 121 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-208ENST00000471322 TRAV8-2A0A0B4J237 113 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 A8MWP6 167 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 IGKV2D-40P01614 121 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-208ENST00000471322 HLA-DMBP28068 263 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 PRR31Q5SQ13 230 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 IGFL4Q6B9Z1 124 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 NDUFA11Q86Y39 141 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 NAT8BQ9UHF3 227 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 TSSC4Q9Y5U2 329 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-208ENST00000471322 FAM231BA6NCW3 169 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 IZUMO1RA6ND01 250 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 ZNF705FA8MVS1 300 aaPredicted RBP13.24□□□□□ -0.29
HSPG2-208ENST00000471322 NPIPB6E9PJ23 425 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 ACTL10Q5JWF8 245 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 GFRA4Q9GZZ7 299 aa13.24□□□□□ -0.29
HSPG2-208ENST00000471322 NOTCH1P46531 2555 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 IGHV4OR15-8A0A075B7B6 117 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 A0A087WW49 117 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 PHOX2AO14813 284 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 RPL11P62913 178 aaKnown RBP13.23□□□□□ -0.29
HSPG2-208ENST00000471322 LINC00322Q6ZN03 302 aaPredicted RBP13.23□□□□□ -0.29
HSPG2-208ENST00000471322 C4orf3Q8WVX3 66 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 ZC2HC1AQ96GY0 325 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 PRR25Q96S07 402 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 NOTCH3Q9UM47 2321 aa13.23□□□□□ -0.29
HSPG2-208ENST00000471322 HOXD3P31249 432 aaPredicted RBP13.22□□□□□ -0.29
HSPG2-208ENST00000471322 WDR73Q6P4I2 378 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 RASL11AQ6T310 242 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 RNF182Q8N6D2 247 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 FRZBQ92765 325 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 VGLL1Q99990 258 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 TRAPPC1Q9Y5R8 145 aa13.22□□□□□ -0.29
HSPG2-208ENST00000471322 TMEM213A2RRL7 107 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 C5orf52A6NGY3 159 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BKO60814 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 CA1P00915 261 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BJP06899 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 TRGC1P0CF51 173 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BOP23527 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BBP33778 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 TCL1AP56279 114 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BDP58876 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BCP62807 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST2H2BEQ16778 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BHQ93079 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BNQ99877 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 HIST1H2BMQ99879 126 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 GNB1LQ9BYB4 327 aa13.21□□□□□ -0.29
HSPG2-208ENST00000471322 SAV1Q9H4B6 383 aaPredicted RBP13.21□□□□□ -0.29
HSPG2-208ENST00000471322 SOCS3O14543 225 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 OVOL1O14753 267 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 MT-ND6P03923 174 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 SYNJ2BPP57105 145 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 SNRPEP62304 92 aaKnown RBP13.21□□□□□ -0.3
HSPG2-208ENST00000471322 KLF5Q13887 457 aaPredicted RBP13.21□□□□□ -0.3
HSPG2-208ENST00000471322 FAM162BQ5T6X4 162 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 TMEM78Q5T7P6 136 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 TCF24Q7RTU0 167 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 KLHL30-AS1Q8NEE0 82 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 DPF1Q92782 380 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 DUX3Q96PT4 197 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 PPP1R14DQ9NXH3 145 aa13.21□□□□□ -0.3
HSPG2-208ENST00000471322 PRAC2D3DTV9 90 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 LINC01619G3V211 115 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 ID1P41134 155 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 FABP9Q0Z7S8 132 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 DEFB136Q30KP8 78 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 SMUG1Q53HV7 270 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 C9orf47Q6ZRZ4 202 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 NUP35Q8NFH5 326 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 OR2D3Q8NGH3 330 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 NEU1Q99519 415 aa13.2□□□□□ -0.3
HSPG2-208ENST00000471322 HIGD1CA8MV81 97 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 270.1 ms