RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-208	ENST00000471226	VGLL1	Q99990	258 aa		10.86	□□□□□ -0.67
ABCF3-208	ENST00000471226	OTOR	Q9NRC9	128 aa		10.86	□□□□□ -0.67
ABCF3-208	ENST00000471226	KLK5	Q9Y337	293 aa	Predicted RBP	10.86	□□□□□ -0.67
ABCF3-208	ENST00000471226	LCE6A	A0A183	80 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	RBAKDN	A6NC62	111 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	PGP	A6NDG6	321 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	KLLN	B2CW77	178 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	C11orf94	C9JXX5	98 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226		H7BYZ3	331 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	NMB	P08949	121 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	SPART-AS1	P0CW21	52 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	CRISP2	P16562	243 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	GCHFR	P30047	84 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	CSN1S1	P47710	185 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	EMP1	P54849	157 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	TAS2R60	P59551	318 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	ZNF726P1	Q15940	193 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	TMEM78	Q5T7P6	136 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226		Q6ZTC4	211 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	TCTE3	Q8IZS6	198 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	ARL6IP6	Q8N6S5	226 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	RXFP4	Q8TDU9	374 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	ZNF492	Q9P255	531 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	DKK2	Q9UBU2	259 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	YTHDF2	Q9Y5A9	579 aa	Known RBP	10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	RYR3	Q15413	4870 aa		10.85	□□□□□ -0.67
ABCF3-208	ENST00000471226	CTXND1	A0A1B0GTU2	59 aa		10.84	□□□□□ -0.67
ABCF3-208	ENST00000471226	DIRC3	C9JPN6	131 aa		10.84	□□□□□ -0.67
ABCF3-208	ENST00000471226	AZU1	P20160	251 aa		10.84	□□□□□ -0.67
ABCF3-208	ENST00000471226	FAM74A1	Q5RGS3	127 aa		10.84	□□□□□ -0.67
ABCF3-208	ENST00000471226	TRAV10	A0A0B4J240	114 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	TRAV12-3	A0A0B4J271	114 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	TRBV7-9	A0A0J9YWB2	115 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	TEX48	A0A1B0GUV7	120 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	PLAC8L1	A1L4L8	177 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226		J3KRW8	73 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	BCL2L11	O43521	198 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	CXorf1	O96002	111 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZNF138	P52744	262 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	AKR1C8P	Q5T2L2	129 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	FAM222A	Q5U5X8	452 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZNF767P	Q75MW2	155 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZFAND2A	Q8N6M9	145 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	TMEM167B	Q9NRX6	74 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	DNAH1	Q9P2D7	4330 aa		10.83	□□□□□ -0.68
ABCF3-208	ENST00000471226	KANTR	A0A1W2PQU2	76 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	C7orf71	A4D174	169 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZNF324	O75467	553 aa	Predicted RBP	10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	SEC11B	P0C7V7	166 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZNF493	Q6ZR52	646 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	C2CD4C	Q8TF44	421 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	HYLS1	Q96M11	299 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	PLA2G2E	Q9NZK7	142 aa		10.82	□□□□□ -0.68
ABCF3-208	ENST00000471226	GPX1	P07203	203 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	CD300C	Q08708	224 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	BTN1A1	Q13410	526 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	TMUB2	Q71RG4	321 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	CMTM2	Q8TAZ6	248 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	RNASE8	Q8TDE3	154 aa	Known RBP	10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	TMEM263	Q8WUH6	116 aa	Known RBP	10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	TMED6	Q8WW62	240 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	C16orf74	Q96GX8	76 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	PYGO2	Q9BRQ0	406 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	NIPSNAP3B	Q9BS92	247 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	ZNF471	Q9BX82	626 aa	Predicted RBP	10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	LENEP	Q9Y5L5	61 aa		10.81	□□□□□ -0.68
ABCF3-208	ENST00000471226	ALMS1	Q8TCU4	4167 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	LYRM9	A8MSI8	78 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	C1QB	P02746	253 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	HTN1	P15515	57 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	RNASE4	P34096	147 aa	Known RBP	10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	PRR9	Q5T870	116 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226		Q8TAT8	98 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	LINC00467	Q9BRT7	94 aa		10.8	□□□□□ -0.68
ABCF3-208	ENST00000471226	DEFB131B	A0A096LNP1	70 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226		A0A1W2PRE2	83 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	TCTA	P57738	103 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	EIF5A	P63241	154 aa	Known RBP	10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	GOLT1A	Q6ZVE7	132 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	C5orf17	Q8NAS9	161 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	TMPRSS5	Q9H3S3	457 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	RPH3AL	Q9UNE2	315 aa		10.79	□□□□□ -0.68
ABCF3-208	ENST00000471226	RYR2	Q92736	4967 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	hCG_2014768	A0A024R1R8	64 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	GGTLC3	B5MD39	225 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	UMAD1	C9J7I0	102 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	PFDN1	O60925	122 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	SUMO1	P63165	101 aa	Known RBP	10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	GNG5	P63218	68 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	CCDC28A	Q8IWP9	274 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	APLN	Q9ULZ1	77 aa		10.78	□□□□□ -0.68
ABCF3-208	ENST00000471226	SERTM2	A0A1B0GWG4	89 aa		10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	MAP1LC3B2	A6NCE7	125 aa		10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	IGLL5	B9A064	214 aa		10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	TCRA	P04437	139 aa		10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	TPT1	P13693	172 aa	Known RBP	10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	FHIT	P49789	147 aa		10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	FGF8	P55075	233 aa	Predicted RBP	10.77	□□□□□ -0.69
ABCF3-208	ENST00000471226	DAD1	P61803	113 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms