RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 TMEM14CQ9P0S9 112 aa9.19□□□□□ -0.94
CPSF4-210ENST00000469897 TRGV2A0A075B6R0 118 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 C7orf71A4D174 169 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 BTN1A1Q13410 526 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 C11orf72Q8NBR9 251 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 VSIG2Q96IQ7 327 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 FAM19A4Q96LR4 140 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 NDUFA13Q9P0J0 144 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 PRELID1Q9Y255 219 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 KLF12Q9Y4X4 402 aa9.18□□□□□ -0.94
CPSF4-210ENST00000469897 RYR1P21817 5038 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 TRGV1A0A0A0MS02 117 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 KLLNB2CW77 178 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 H3BNG1 76 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 SIX6O95475 246 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 GPX1P07203 203 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 ICAM4Q14773 271 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 FAM122CQ6P4D5 195 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 Q6ZQT7 251 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 SPATA12Q7Z6I5 190 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 EIF4E3Q8N5X7 224 aaKnown RBP9.17□□□□□ -0.94
CPSF4-210ENST00000469897 THAP6Q8TBB0 222 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 VGLL1Q99990 258 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 CCDC32Q9BV29 185 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 SLC25A2Q9BXI2 301 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 Q9H3A6 140 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 FUT9Q9Y231 359 aa9.17□□□□□ -0.94
CPSF4-210ENST00000469897 IGKV2-40A0A087WW87 121 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-210ENST00000469897 A0A096LPF7 62 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 IGKV2D-40P01614 121 aaPredicted RBP9.16□□□□□ -0.94
CPSF4-210ENST00000469897 NBEAP1P0C6P0 100 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 ANXA2RQ3ZCQ2 193 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 TTC32Q5I0X7 151 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 MIR17HGQ75NE6 70 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 ZNF680Q8NEM1 530 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 NPCDR1Q9BY65 106 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 AAMDCQ9H7C9 122 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
CPSF4-210ENST00000469897 MRPS16Q9Y3D3 137 aaKnown RBP9.16□□□□□ -0.94
CPSF4-210ENST00000469897 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 SPINK4O60575 86 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 MPDU1O75352 247 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 CDK2AP2O75956 126 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 PDE6HQ13956 83 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 MZT2BQ6NZ67 158 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 MAPKAPK5-AS1Q8N8E1 139 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 OR5C1Q8NGR4 320 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 C18orf15Q96N68 181 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
CPSF4-210ENST00000469897 NACAE9PAV3 2078 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 IGHV3-53P01767 116 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 CRISP2P16562 243 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 TMEM78Q5T7P6 136 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 PRR9Q5T870 116 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 ZFAND2AQ8N6M9 145 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 SLC25A31Q9H0C2 315 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 OR5AC2Q9NZP5 309 aa9.14□□□□□ -0.95
CPSF4-210ENST00000469897 IGHV1OR15-1A0A075B7D0 117 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 A0A1W2PPQ1 181 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 E5RGE8 158 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 H0YIZ8 118 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 RGS13O14921 159 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 PAX4O43316 350 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 NMBP08949 121 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 OR10J4P0C629 311 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 TCL1AP56279 114 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 KRTAP10-2P60368 255 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 LRRC37A5PQ49AS3 106 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 PAXXQ9BUH6 204 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 MRPL16Q9NX20 251 aaKnown RBP9.13□□□□□ -0.95
CPSF4-210ENST00000469897 ZNF492Q9P255 531 aa9.13□□□□□ -0.95
CPSF4-210ENST00000469897 ZNF138P52744 262 aa9.12□□□□□ -0.95
CPSF4-210ENST00000469897 RANP62826 216 aaKnown RBP9.12□□□□□ -0.95
CPSF4-210ENST00000469897 ASAH1Q13510 395 aa9.12□□□□□ -0.95
CPSF4-210ENST00000469897 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
CPSF4-210ENST00000469897 FXYD5Q96DB9 178 aa9.12□□□□□ -0.95
CPSF4-210ENST00000469897 WDR61Q9GZS3 305 aaKnown RBP9.12□□□□□ -0.95
CPSF4-210ENST00000469897 HSPG2P98160 4391 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 LRP1BQ9NZR2 4599 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 PRAF2O60831 178 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 BTF3P20290 206 aaKnown RBP9.11□□□□□ -0.95
CPSF4-210ENST00000469897 Q8TAT8 98 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 ST6GAL2Q96JF0 529 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 NMES1Q9C002 83 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 HHLA3Q9XRX5 114 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 TNFRSF18Q9Y5U5 241 aa9.11□□□□□ -0.95
CPSF4-210ENST00000469897 SIVA1O15304 175 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 LINC00315P59091 139 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 FHL2Q14192 279 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 MUC21Q5SSG8 566 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 ENKURQ8TC29 256 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 PHYHIPLQ96FC7 376 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 C8orf49Q96NF6 230 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 ARPC5LQ9BPX5 153 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
CPSF4-210ENST00000469897 PRO0255Q9UI72 69 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms