RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 DPPA3Q6W0C5 159 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 SMIM15Q7Z3B0 74 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 MRPL52Q86TS9 123 aaKnown RBP6.25□□□□□ -1.41
SSBP1-208ENST00000469123 TMEM256Q8N2U0 113 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 OR11H2Q8NH07 326 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 RXFP4Q8TDU9 374 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 FXYD5Q96DB9 178 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 C20orf144Q9BQM9 153 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 EDA2RQ9HAV5 297 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 RETNQ9HD89 108 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 TMEM167BQ9NRX6 74 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 GOLT1BQ9Y3E0 138 aa6.25□□□□□ -1.41
SSBP1-208ENST00000469123 TRBV7-9A0A0J9YWB2 115 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 CTXND1A0A1B0GTU2 59 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 TEX48A0A1B0GUV7 120 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 SERTM2A0A1B0GWG4 89 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 TMEM189A5PLL7 270 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 RBAKDNA6NC62 111 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 F6UB75 175 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 SMLR1H3BR10 107 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 NDUFB4O95168 129 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 INSP01308 110 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 IFNA7P01567 189 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 SLC25A5P05141 298 aaKnown RBP6.24□□□□□ -1.41
SSBP1-208ENST00000469123 OR10J4P0C629 311 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 SEC11BP0C7V7 166 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 TPT1P13693 172 aaKnown RBP6.24□□□□□ -1.41
SSBP1-208ENST00000469123 CDKN1BP46527 198 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 AMTNQ6UX39 209 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 RPP25LQ8N5L8 163 aaKnown RBP6.24□□□□□ -1.41
SSBP1-208ENST00000469123 CSNK1G2-AS1Q8NCQ2 148 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 OR11H4Q8NGC9 324 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 STOML3Q8TAV4 291 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 MUC7Q8TAX7 377 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 SFT2D1Q8WV19 159 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 BLNKQ8WV28 456 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 IGF2BP2-AS1Q96M15 143 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 LINC00477Q96M19 166 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 CYTL1Q9NRR1 136 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 RFNGQ9Y644 331 aa6.24□□□□□ -1.41
SSBP1-208ENST00000469123 NPIPB6E9PJ23 425 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 NMBP08949 121 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 ARL14EPLP0DKL9 152 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 LEPP41159 167 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 AKR1D1P51857 326 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF705AQ6ZN79 300 aaPredicted RBP6.23□□□□□ -1.41
SSBP1-208ENST00000469123 BAP18Q8IXM2 172 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 CMTM2Q8TAZ6 248 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 TMED6Q8WW62 240 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF503Q96F45 646 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF471Q9BX82 626 aaPredicted RBP6.23□□□□□ -1.41
SSBP1-208ENST00000469123 NKX6-2Q9C056 277 aaPredicted RBP6.23□□□□□ -1.41
SSBP1-208ENST00000469123 SH3BGRL3Q9H299 93 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 Q9H3A6 140 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
SSBP1-208ENST00000469123 FBLL1A6NHQ2 334 aaKnown RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF705FA8MVS1 300 aaPredicted RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 H3BTX0 84 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 IGKV3-20P01619 116 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF705DP0CH99 300 aaPredicted RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 ZNF705BP0CI00 300 aaPredicted RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 HLA-DMBP28068 263 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 GCHFRP30047 84 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 RPL35P42766 123 aaKnown RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 RAB5CP51148 216 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 BTN1A1Q13410 526 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 ICAM4Q14773 271 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 LGALSLQ3ZCW2 172 aaPredicted RBP6.22□□□□□ -1.41
SSBP1-208ENST00000469123 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 TMUB2Q71RG4 321 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 PHYHIPLQ96FC7 376 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 TMEM208Q9BTX3 173 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 SLC35B3Q9H1N7 401 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 NIT2Q9NQR4 276 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 LENEPQ9Y5L5 61 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 ARL2-SNX15V9GYD0 113 aa6.22□□□□□ -1.41
SSBP1-208ENST00000469123 DNAH9Q9NYC9 4486 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 A0A0J9YWU9 116 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 A0A1W2PRE2 83 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 CBY3A6NI87 242 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 K7EQM0 130 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 HBE1P02100 147 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 SNRPCP09234 159 aaKnown RBP6.21□□□□□ -1.42
SSBP1-208ENST00000469123 DEFB1P60022 68 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 RANP62826 216 aaKnown RBP6.21□□□□□ -1.42
SSBP1-208ENST00000469123 SPINK13Q1W4C9 94 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 RRN3P1Q2M238 152 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 TEX261Q6UWH6 196 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 EXOC3-AS1Q8N2X6 119 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 Q8NAQ8 132 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 C5orf17Q8NAS9 161 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 X6R8D5 127 aa6.21□□□□□ -1.42
SSBP1-208ENST00000469123 MAP1LC3B2A6NCE7 125 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 PGPA6NDG6 321 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 DIRC3C9JPN6 131 aa6.2□□□□□ -1.42
SSBP1-208ENST00000469123 TEX46H3BTG2 121 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms