RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 CRXO43186 299 aaPredicted RBP13.85□□□□□ -0.19
USP11-205ENST00000467378 CT45A10P0DMU9 189 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 CSN1S1P47710 185 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 SULT1A2P50226 295 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 RAB5CP51148 216 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 SPINK13Q1W4C9 94 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 FAM74A1Q5RGS3 127 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 C9orf47Q6ZRZ4 202 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 IQCF2Q8IXL9 164 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 ARL6IP6Q8N6S5 226 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 RARRES2Q99969 163 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 AGPAT4-IT1Q9H0P7 198 aa13.85□□□□□ -0.19
USP11-205ENST00000467378 HECTD4Q9Y4D8 3996 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 IGKV2-40A0A087WW87 121 aaPredicted RBP13.84□□□□□ -0.19
USP11-205ENST00000467378 A0A1W2PRE2 83 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 IGKV2D-40P01614 121 aaPredicted RBP13.84□□□□□ -0.19
USP11-205ENST00000467378 AMBPP02760 352 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 OR11H2Q8NH07 326 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 SFT2D1Q8WV19 159 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 LINC00477Q96M19 166 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 VGLL1Q99990 258 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 PPP1R14DQ9NXH3 145 aa13.84□□□□□ -0.19
USP11-205ENST00000467378 RBAKDNA6NC62 111 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 ZNF705EA8MWA4 302 aaPredicted RBP13.83□□□□□ -0.2
USP11-205ENST00000467378 H2AFB1P0C5Y9 115 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 FAM19A4Q96LR4 140 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 IGF2BP2-AS1Q96M15 143 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 ODF3Q96PU9 254 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 X6R8D5 127 aa13.83□□□□□ -0.2
USP11-205ENST00000467378 SLC25A5P05141 298 aaKnown RBP13.82□□□□□ -0.2
USP11-205ENST00000467378 SUMO1P63165 101 aaKnown RBP13.82□□□□□ -0.2
USP11-205ENST00000467378 ZNF705AQ6ZN79 300 aaPredicted RBP13.82□□□□□ -0.2
USP11-205ENST00000467378 C1orf158Q8N1D5 194 aa13.82□□□□□ -0.2
USP11-205ENST00000467378 CMTM2Q8TAZ6 248 aa13.82□□□□□ -0.2
USP11-205ENST00000467378 YTHDF2Q9Y5A9 579 aaKnown RBP13.82□□□□□ -0.2
USP11-205ENST00000467378 TRAV12-2A0A075B6T6 113 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 FAM74A7A6NL05 159 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 GGTLC3B5MD39 225 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 CDKN1BP46527 198 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 UBE2G2P60604 165 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 PMS2P11Q13670 270 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 ZNF492Q9P255 531 aa13.81□□□□□ -0.2
USP11-205ENST00000467378 CXorf65A6NEN9 183 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 GNG5P63218 68 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 KIR3DS1Q14943 382 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 TMEM78Q5T7P6 136 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 C5orf17Q8NAS9 161 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 RPH3ALQ9UNE2 315 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 KMT2AQ03164 3969 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 KIAA1109Q2LD37 5005 aa13.8□□□□□ -0.2
USP11-205ENST00000467378 TRAV1-1A0A0B4J248 108 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 A0A1B0GV50 99 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 RBMY1A1P0DJD3 496 aaKnown RBP13.79□□□□□ -0.2
USP11-205ENST00000467378 RBMY1CP0DJD4 496 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 TSPOP30536 169 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 LEPP41159 167 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 RBMY1FQ15415 496 aaKnown RBP13.79□□□□□ -0.2
USP11-205ENST00000467378 ALKAL2Q6UX46 152 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 NEU1Q99519 415 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 EPDR1Q9UM22 224 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 DNAH10Q8IVF4 4471 aa13.79□□□□□ -0.2
USP11-205ENST00000467378 INSP01308 110 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 TCRAP04437 139 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 CRISP2P16562 243 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 ZNF138P52744 262 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 CCL20P78556 96 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 GOLT1AQ6ZVE7 132 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 Q8NAQ8 132 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 NKX6-2Q9C056 277 aaPredicted RBP13.78□□□□□ -0.2
USP11-205ENST00000467378 GOLT1BQ9Y3E0 138 aa13.78□□□□□ -0.2
USP11-205ENST00000467378 IGHV3OR16-12A0A075B7B8 117 aa13.77□□□□□ -0.21
USP11-205ENST00000467378 A0A0J9YWU9 116 aa13.77□□□□□ -0.21
USP11-205ENST00000467378 MIFP14174 115 aa13.77□□□□□ -0.21
USP11-205ENST00000467378 CCDC28AQ8IWP9 274 aa13.77□□□□□ -0.21
USP11-205ENST00000467378 ARL2-SNX15V9GYD0 113 aa13.77□□□□□ -0.21
USP11-205ENST00000467378 TRBV7-9A0A0J9YWB2 115 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 SERTM2A0A1B0GWG4 89 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 NUPR2A6NF83 97 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 SMIM9A6NGZ8 99 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 KLLNB2CW77 178 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 J3KRW8 73 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 PAGE4O60829 102 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 NMBP08949 121 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 GFI1BQ5VTD9 330 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 Q8TAT8 98 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 C20orf144Q9BQM9 153 aa13.76□□□□□ -0.21
USP11-205ENST00000467378 TRAV8-1A0A0A6YYK1 113 aa13.75□□□□□ -0.21
USP11-205ENST00000467378 IGHV4-28A0A0C4DH34 117 aa13.75□□□□□ -0.21
USP11-205ENST00000467378 ZFAND2AQ8N6M9 145 aa13.75□□□□□ -0.21
USP11-205ENST00000467378 C11orf68Q9H3H3 251 aaKnown RBP13.75□□□□□ -0.21
USP11-205ENST00000467378 LENEPQ9Y5L5 61 aa13.75□□□□□ -0.21
USP11-205ENST00000467378 TEX46H3BTG2 121 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 DEFB4AO15263 64 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 HBE1P02100 147 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 ATP5G3P48201 142 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 PPT1P50897 306 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 CST9LP1Q5W188 147 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 TMEM256Q8N2U0 113 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 ATG101Q9BSB4 218 aa13.74□□□□□ -0.21
USP11-205ENST00000467378 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.6 ms