RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TRBV7-9A0A0J9YWB2 115 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 K7EQM0 130 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 IFNA1P01562 189 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 HIST1H2BAQ96A08 127 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 ZMAT4Q9H898 229 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 LENEPQ9Y5L5 61 aa11.69□□□□□ -0.54
GPC1-207ENST00000466624 HUWE1Q7Z6Z7 4374 aaKnown RBP11.69□□□□□ -0.54
GPC1-207ENST00000466624 FBLL1A6NHQ2 334 aaKnown RBP11.68□□□□□ -0.54
GPC1-207ENST00000466624 NMBP08949 121 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 CT45A10P0DMU9 189 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 PRB4P10163 310 aaPredicted RBP11.68□□□□□ -0.54
GPC1-207ENST00000466624 TSPOP30536 169 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 TAGLN2P37802 199 aaKnown RBP11.68□□□□□ -0.54
GPC1-207ENST00000466624 LEPP41159 167 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 CDKN1BP46527 198 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 GNG5P63218 68 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 ERCC8Q13216 396 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 GOLT1AQ6ZVE7 132 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 CYB561D1Q8N8Q1 229 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 CSNK1G2-AS1Q8NCQ2 148 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 RNF183Q96D59 192 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 VGLL1Q99990 258 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 ZNF492Q9P255 531 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 GNG13Q9P2W3 67 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 RPH3ALQ9UNE2 315 aa11.68□□□□□ -0.54
GPC1-207ENST00000466624 F6UZH7 168 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 CRISP2P16562 243 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 ATP5G3P48201 142 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 ZNF138P52744 262 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 SPINK13Q1W4C9 94 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 DEFB135Q30KP9 77 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 RCHY1Q96PM5 261 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 XCL2Q9UBD3 114 aa11.67□□□□□ -0.54
GPC1-207ENST00000466624 C11orf94C9JXX5 98 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 M0R2Z0 102 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 PEX7O00628 323 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 CRXO43186 299 aaPredicted RBP11.66□□□□□ -0.54
GPC1-207ENST00000466624 SPRY2O43597 315 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 TMEM75Q8N9X5 138 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 IGF2BP2-AS1Q96M15 143 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 OVOL2Q9BRP0 275 aa11.66□□□□□ -0.54
GPC1-207ENST00000466624 INSP01308 110 aa11.65□□□□□ -0.54
GPC1-207ENST00000466624 BCL2P10415 239 aa11.65□□□□□ -0.54
GPC1-207ENST00000466624 FXYD7P58549 80 aa11.65□□□□□ -0.54
GPC1-207ENST00000466624 C20orf144Q9BQM9 153 aa11.65□□□□□ -0.54
GPC1-207ENST00000466624 KLLNB2CW77 178 aa11.64□□□□□ -0.55
GPC1-207ENST00000466624 IGLV2-11P01706 119 aa11.64□□□□□ -0.55
GPC1-207ENST00000466624 MEF2BQ02080 365 aaPredicted RBP11.64□□□□□ -0.55
GPC1-207ENST00000466624 ZNF767PQ75MW2 155 aa11.64□□□□□ -0.55
GPC1-207ENST00000466624 VAX2Q9UIW0 290 aa11.64□□□□□ -0.55
GPC1-207ENST00000466624 TRAV8-1A0A0A6YYK1 113 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
GPC1-207ENST00000466624 ZNF705AQ6ZN79 300 aaPredicted RBP11.63□□□□□ -0.55
GPC1-207ENST00000466624 TMEM256Q8N2U0 113 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 ZFAND2AQ8N6M9 145 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 Q8TAT8 98 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 RETNQ9HD89 108 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 PSG8Q9UQ74 426 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 KLF12Q9Y4X4 402 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 COL7A1Q02388 2944 aa11.63□□□□□ -0.55
GPC1-207ENST00000466624 TRAV12-2A0A075B6T6 113 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 TRBV6-1A0A0K0K1D8 114 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 LOC102723971A0A1B0GUV8 181 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 PDE6DO43924 150 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 S100A9P06702 114 aaKnown RBP11.62□□□□□ -0.55
GPC1-207ENST00000466624 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 C11orf52Q96A22 123 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 FMC1Q96HJ9 113 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 NEU1Q99519 415 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 RARRES2Q99969 163 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 NDFIP1Q9BT67 221 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 GOLT1BQ9Y3E0 138 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 NBEAL2Q6ZNJ1 2754 aa11.62□□□□□ -0.55
GPC1-207ENST00000466624 SCO2A0A1W2PP80 73 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 RBFOX3A6NFN3 312 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 NDUFS6O75380 124 aaKnown RBP11.61□□□□□ -0.55
GPC1-207ENST00000466624 GPX1P07203 203 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 AKR1C3P42330 323 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 IFITM2Q01629 132 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 OR11H2Q8NH07 326 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 FAM210AQ96ND0 272 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 TENM3Q9P273 2699 aa11.61□□□□□ -0.55
GPC1-207ENST00000466624 C7orf71A4D174 169 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 SMIM9A6NGZ8 99 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 UBE2G1P62253 170 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 KIR3DS1Q14943 382 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 TMEM183BQ1AE95 376 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 ZNF506Q5JVG8 444 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 SAPCD1Q5SSQ6 148 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 Q86TA4 180 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 LINC00479Q96M42 142 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 U3KQK5 164 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 X6R8D5 127 aa11.6□□□□□ -0.55
GPC1-207ENST00000466624 H7BYZ3 331 aa11.59□□□□□ -0.55
GPC1-207ENST00000466624 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms