RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 IGKV2-40A0A087WW87 121 aaPredicted RBP15.32■□□□□ 0.04
LIME1-203ENST00000465591 IGKV2D-40P01614 121 aaPredicted RBP15.32■□□□□ 0.04
LIME1-203ENST00000465591 ZNF493Q6ZR52 646 aa15.32■□□□□ 0.04
LIME1-203ENST00000465591 PHYHIPLQ96FC7 376 aa15.32■□□□□ 0.04
LIME1-203ENST00000465591 PAXXQ9BUH6 204 aa15.32■□□□□ 0.04
LIME1-203ENST00000465591 TNFSF18Q9UNG2 199 aa15.32■□□□□ 0.04
LIME1-203ENST00000465591 TIMM8BQ9Y5J9 83 aaPredicted RBP15.32■□□□□ 0.04
LIME1-203ENST00000465591 HECTD4Q9Y4D8 3996 aa15.32■□□□□ 0.04
LIME1-203ENST00000465591 C17orf112F2Z3M2 114 aa15.31■□□□□ 0.04
LIME1-203ENST00000465591 EIF3GO75821 320 aaKnown RBP eCLIP15.31■□□□□ 0.04
LIME1-203ENST00000465591 FFAR4Q5NUL3 377 aa15.31■□□□□ 0.04
LIME1-203ENST00000465591 FAM122CQ6P4D5 195 aa15.31■□□□□ 0.04
LIME1-203ENST00000465591 hCG_2014768A0A024R1R8 64 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 F5H768 121 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 G3V3Q6 166 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 M0R2N4 97 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 CD300CQ08708 224 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 RNF141Q8WVD5 230 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 VGLL1Q99990 258 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 AAMDCQ9H7C9 122 aa15.3■□□□□ 0.04
LIME1-203ENST00000465591 CBY3A6NI87 242 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 KLLNB2CW77 178 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 SMLR1H3BR10 107 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 BTN1A1Q13410 526 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 ZNF266Q14584 549 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 C9orf47Q6ZRZ4 202 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 UBE2DNLQ8IWF7 75 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 LINC00612Q8N6U2 182 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 LINC00477Q96M19 166 aa15.29■□□□□ 0.04
LIME1-203ENST00000465591 C7orf71A4D174 169 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 ARPC5O15511 151 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 OR7C2O60412 319 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 SLC25A5P05141 298 aaKnown RBP15.28■□□□□ 0.04
LIME1-203ENST00000465591 ATP5G1P05496 136 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 ATP5G3P48201 142 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 PRR9Q5T870 116 aa15.28■□□□□ 0.04
LIME1-203ENST00000465591 IGLV2-18A0A075B6J9 118 aa15.27■□□□□ 0.04
LIME1-203ENST00000465591 ZNF324O75467 553 aaPredicted RBP15.27■□□□□ 0.04
LIME1-203ENST00000465591 Q6ZQT7 251 aa15.27■□□□□ 0.04
LIME1-203ENST00000465591 CCDC28AQ8IWP9 274 aa15.27■□□□□ 0.04
LIME1-203ENST00000465591 ZFAND2AQ8N6M9 145 aa15.27■□□□□ 0.04
LIME1-203ENST00000465591 PYGO2Q9BRQ0 406 aa15.27■□□□□ 0.04
LIME1-203ENST00000465591 RNF222A6NCQ9 220 aa15.26■□□□□ 0.03
LIME1-203ENST00000465591 HMSDA8MTL9 139 aa15.26■□□□□ 0.03
LIME1-203ENST00000465591 CRISP2P16562 243 aa15.26■□□□□ 0.03
LIME1-203ENST00000465591 C15orf53Q8NAA6 179 aa15.26■□□□□ 0.03
LIME1-203ENST00000465591 ST6GAL2Q96JF0 529 aa15.26■□□□□ 0.03
LIME1-203ENST00000465591 BORCS7-ASMTA0A0B4J1R7 106 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 TAAR5O14804 337 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 RNASE4P34096 147 aaKnown RBP15.25■□□□□ 0.03
LIME1-203ENST00000465591 RANP62826 216 aaKnown RBP15.25■□□□□ 0.03
LIME1-203ENST00000465591 UBE2L3P68036 154 aaKnown RBP15.25■□□□□ 0.03
LIME1-203ENST00000465591 RNF212Q495C1 297 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 AKAP14Q86UN6 197 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 TCTE3Q8IZS6 198 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 Q8TAT8 98 aa15.25■□□□□ 0.03
LIME1-203ENST00000465591 GAGE12BA1L429 117 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 GAGE7O76087 117 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 GAGE12FP0CL80 117 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 GAGE12GP0CL81 117 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 GAGE12IP0CL82 117 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 C11orf72Q8NBR9 251 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 Q9H3A6 140 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 ZNF492Q9P255 531 aa15.24■□□□□ 0.03
LIME1-203ENST00000465591 SNURFLB1AK76 121 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 RTL8CO15255 209 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 RAB2AP61019 212 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 LGALS9BQ3B8N2 356 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 TMEM78Q5T7P6 136 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 Q6ZR54 194 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 GSN-AS1Q9NRJ2 163 aa15.23■□□□□ 0.03
LIME1-203ENST00000465591 NUDT3O95989 172 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 GPX1P07203 203 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 HOXA5P20719 270 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 ZNF345Q14585 488 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 KHDC3LQ587J8 217 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 Q6ZTI0 123 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 OR11H4Q8NGC9 324 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 LINC00467Q9BRT7 94 aa15.22■□□□□ 0.03
LIME1-203ENST00000465591 MUC4Q99102 2169 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 A0A0D9SG52 128 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 NMBP08949 121 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 ZNF138P52744 262 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 DAZ2Q13117 558 aaKnown RBP15.21■□□□□ 0.03
LIME1-203ENST00000465591 LYPD1Q8N2G4 141 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 KCNRGQ8N5I3 272 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 TP53TG3Q9ULZ0 132 aa15.21■□□□□ 0.03
LIME1-203ENST00000465591 A0A1B0GVG6 124 aa15.2■□□□□ 0.02
LIME1-203ENST00000465591 M6PRP20645 277 aa15.2■□□□□ 0.02
LIME1-203ENST00000465591 TAS2R45P59539 299 aa15.2■□□□□ 0.02
LIME1-203ENST00000465591 ANXA2RQ3ZCQ2 193 aa15.2■□□□□ 0.02
LIME1-203ENST00000465591 EIF4E3Q8N5X7 224 aaKnown RBP15.2■□□□□ 0.02
LIME1-203ENST00000465591 HSD17B11Q8NBQ5 300 aa15.2■□□□□ 0.02
LIME1-203ENST00000465591 HMGB3O15347 200 aaKnown RBP15.19■□□□□ 0.02
LIME1-203ENST00000465591 OR5I1Q13606 314 aa15.19■□□□□ 0.02
LIME1-203ENST00000465591 ACOT6Q3I5F7 207 aaPredicted RBP15.19■□□□□ 0.02
LIME1-203ENST00000465591 RPL7L1Q6DKI1 246 aaKnown RBP15.19■□□□□ 0.02
LIME1-203ENST00000465591 GNPNAT1Q96EK6 184 aaPredicted RBP15.19■□□□□ 0.02
LIME1-203ENST00000465591 ARPC5LQ9BPX5 153 aa15.19■□□□□ 0.02
LIME1-203ENST00000465591 PSMG3Q9BT73 122 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms