RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ARL2-SNX15V9GYD0 113 aa12.32□□□□□ -0.44
USP39-211ENST00000465282 TEX46H3BTG2 121 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 M0R2Z0 102 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 INSP01308 110 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 CT45A10P0DMU9 189 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 FGF8P55075 233 aaPredicted RBP12.31□□□□□ -0.44
USP39-211ENST00000465282 C20orf144Q9BQM9 153 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 AGPAT4-IT1Q9H0P7 198 aa12.31□□□□□ -0.44
USP39-211ENST00000465282 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
USP39-211ENST00000465282 PPT1P50897 306 aa12.3□□□□□ -0.44
USP39-211ENST00000465282 TMEM256Q8N2U0 113 aa12.3□□□□□ -0.44
USP39-211ENST00000465282 C11orf68Q9H3H3 251 aaKnown RBP12.3□□□□□ -0.44
USP39-211ENST00000465282 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
USP39-211ENST00000465282 IGKV2-40A0A087WW87 121 aaPredicted RBP12.29□□□□□ -0.44
USP39-211ENST00000465282 TRAV1-1A0A0B4J248 108 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 K7EQM0 130 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 IGKV2D-40P01614 121 aaPredicted RBP12.29□□□□□ -0.44
USP39-211ENST00000465282 ZNF138P52744 262 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 NKX2-5P52952 324 aaPredicted RBP12.29□□□□□ -0.44
USP39-211ENST00000465282 SUMO1P63165 101 aaKnown RBP12.29□□□□□ -0.44
USP39-211ENST00000465282 ERCC8Q13216 396 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 FAM19A4Q96LR4 140 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 TCEAL7Q9BRU2 100 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 TMPRSS5Q9H3S3 457 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 ZNF492Q9P255 531 aa12.29□□□□□ -0.44
USP39-211ENST00000465282 FBLL1A6NHQ2 334 aaKnown RBP12.28□□□□□ -0.44
USP39-211ENST00000465282 GGTLC3B5MD39 225 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 HBE1P02100 147 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 CRISP2P16562 243 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 C1orf158Q8N1D5 194 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 IL17DQ8TAD2 202 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 VGLL1Q99990 258 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 TMEM208Q9BTX3 173 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 X6R8D5 127 aa12.28□□□□□ -0.44
USP39-211ENST00000465282 FAM74A7A6NL05 159 aa12.27□□□□□ -0.45
USP39-211ENST00000465282 PRB4P10163 310 aaPredicted RBP12.27□□□□□ -0.45
USP39-211ENST00000465282 EPDR1Q9UM22 224 aa12.27□□□□□ -0.45
USP39-211ENST00000465282 TRAV12-2A0A075B6T6 113 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 A0A0J9YWU9 116 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 TMEM189A5PLL7 270 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 KLLNB2CW77 178 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 TCRAP04437 139 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 GOLT1AQ6ZVE7 132 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 Q8NAQ8 132 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 ATG101Q9BSB4 218 aa12.26□□□□□ -0.45
USP39-211ENST00000465282 YTHDF2Q9Y5A9 579 aaKnown RBP12.26□□□□□ -0.45
USP39-211ENST00000465282 IGHV3OR16-12A0A075B7B8 117 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 F6UZH7 168 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 H7BYZ3 331 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 IFNA7P01567 189 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 UBE2G2P60604 165 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 GFI1BQ5VTD9 330 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 CYB561D1Q8N8Q1 229 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 HIST1H2BAQ96A08 127 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 RPH3ALQ9UNE2 315 aa12.25□□□□□ -0.45
USP39-211ENST00000465282 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 GPX1P07203 203 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 TAS2R60P59551 318 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 PMS2P11Q13670 270 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 RRN3P1Q2M238 152 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 CCDC28AQ8IWP9 274 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 NIPSNAP3BQ9BS92 247 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 MANBALQ9NQG1 85 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 BOLA1Q9Y3E2 137 aa12.24□□□□□ -0.45
USP39-211ENST00000465282 C7orf71A4D174 169 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 RBMY1A1P0DJD3 496 aaKnown RBP12.23□□□□□ -0.45
USP39-211ENST00000465282 RBMY1CP0DJD4 496 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 GNG5P63218 68 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 BLOC1S1P78537 153 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 RBMY1FQ15415 496 aaKnown RBP12.23□□□□□ -0.45
USP39-211ENST00000465282 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 ALKAL2Q6UX46 152 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 ZFAND2AQ8N6M9 145 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 TMEM75Q8N9X5 138 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 LINC01587Q99440 93 aa12.23□□□□□ -0.45
USP39-211ENST00000465282 PAGE4O60829 102 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 Q8TAT8 98 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 MUC7Q8TAX7 377 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 TXNDC17Q9BRA2 123 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 NDFIP1Q9BT67 221 aa12.22□□□□□ -0.45
USP39-211ENST00000465282 DNAH7Q8WXX0 4024 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 TRAV12-3A0A0B4J271 114 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 A0A1B0GV50 99 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 C3orf84H3BNL1 204 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 PEX7O00628 323 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 ZNF324O75467 553 aaPredicted RBP12.21□□□□□ -0.45
USP39-211ENST00000465282 TAGLN2P37802 199 aaKnown RBP12.21□□□□□ -0.45
USP39-211ENST00000465282 KIR3DS1Q14943 382 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 ZNF493Q6ZR52 646 aa12.21□□□□□ -0.45
USP39-211ENST00000465282 TEX48A0A1B0GUV7 120 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 LOC102723971A0A1B0GUV8 181 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 J3KRW8 73 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 IFNA1P01562 189 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 RNASE4P34096 147 aaKnown RBP12.2□□□□□ -0.46
USP39-211ENST00000465282 FLI1Q01543 452 aaPredicted RBP12.2□□□□□ -0.46
USP39-211ENST00000465282 SAPCD1Q5SSQ6 148 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 LINC00467Q9BRT7 94 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 TREM1Q9NP99 234 aa12.2□□□□□ -0.46
USP39-211ENST00000465282 PSG8Q9UQ74 426 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 242.4 ms