RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 MPDU1O75352 247 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 CRYBA4P53673 196 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 PDE6HQ13956 83 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
HMGN1-210ENST00000464078 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
HMGN1-210ENST00000464078 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 MBPP02686 304 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-210ENST00000464078 S100A5P33763 92 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 MIC13Q5XKP0 118 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 NRARPQ7Z6K4 114 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 TMEM14CQ9P0S9 112 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
HMGN1-210ENST00000464078 NDUFB4O95168 129 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
HMGN1-210ENST00000464078 ERCC8Q13216 396 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 MITD1Q8WV92 249 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 GSKIPQ9P0R6 139 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
HMGN1-210ENST00000464078 GPX1P07203 203 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 GCSHP23434 173 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 FHL2Q14192 279 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 C12orf45Q8N5I9 185 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-210ENST00000464078 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
HMGN1-210ENST00000464078 MRPL16Q9NX20 251 aaKnown RBP11.7□□□□□ -0.54
HMGN1-210ENST00000464078 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
HMGN1-210ENST00000464078 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
HMGN1-210ENST00000464078 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
HMGN1-210ENST00000464078 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
HMGN1-210ENST00000464078 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
HMGN1-210ENST00000464078 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
HMGN1-210ENST00000464078 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 L7N2F9 121 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 RGS13O14921 159 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-210ENST00000464078 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
HMGN1-210ENST00000464078 EVI2AP22794 236 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 VAMP2P63027 116 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 SPANXN2Q5MJ10 180 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 PRR9Q5T870 116 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 Q6ZSN1 163 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 TMEM70Q9BUB7 260 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
HMGN1-210ENST00000464078 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
HMGN1-210ENST00000464078 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 PRAF2O60831 178 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 SRIP30626 198 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 BTCP35070 178 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
HMGN1-210ENST00000464078 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 K7EQD1 137 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 CST7O76096 145 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 INPP1P49441 399 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 CAV2P51636 162 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 BAK1Q16611 211 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 TMEM78Q5T7P6 136 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-210ENST00000464078 C20orf85Q9H1P6 137 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 TIMM9Q9Y5J7 89 aa11.66□□□□□ -0.54
HMGN1-210ENST00000464078 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-210ENST00000464078 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
HMGN1-210ENST00000464078 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-210ENST00000464078 PYYP10082 97 aa11.65□□□□□ -0.54
HMGN1-210ENST00000464078 ZNF846Q147U1 533 aa11.65□□□□□ -0.54
HMGN1-210ENST00000464078 CNPY1Q3B7I2 92 aa11.65□□□□□ -0.54
HMGN1-210ENST00000464078 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
HMGN1-210ENST00000464078 TRGV4A0A0C4DH28 118 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 ORM1P02763 201 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 SULT1A1P50225 295 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 BCAP31P51572 246 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 BAXQ07812 192 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 Q6ZQT7 251 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 OR10G4Q8NGN3 311 aa11.64□□□□□ -0.55
HMGN1-210ENST00000464078 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
HMGN1-210ENST00000464078 LSM5Q9Y4Y9 91 aaKnown RBP11.64□□□□□ -0.55
HMGN1-210ENST00000464078 CENPXA8MT69 81 aa11.63□□□□□ -0.55
HMGN1-210ENST00000464078 CCSO14618 274 aa11.63□□□□□ -0.55
HMGN1-210ENST00000464078 CRYGDP07320 174 aa11.63□□□□□ -0.55
HMGN1-210ENST00000464078 S100A11P31949 105 aa11.63□□□□□ -0.55
HMGN1-210ENST00000464078 BLNKQ8WV28 456 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms