RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 MPDU1O75352 247 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 CRYBA4P53673 196 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 BTN1A1Q13410 526 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 PDE6HQ13956 83 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 MRPL23Q16540 153 aaKnown RBP11.73□□□□□ -0.53
HMGN1-209ENST00000463631 LYPD5Q6UWN5 251 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 OR1L4Q8NGR5 311 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 LINC00477Q96M19 166 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 LY96Q9Y6Y9 160 aa11.73□□□□□ -0.53
HMGN1-209ENST00000463631 TRAV5A0A0B4J249 113 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 MBPP02686 304 aaPredicted RBP11.72□□□□□ -0.53
HMGN1-209ENST00000463631 S100A5P33763 92 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 MIC13Q5XKP0 118 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 NRARPQ7Z6K4 114 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 AGPAT4-IT1Q9H0P7 198 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 TMEM14CQ9P0S9 112 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 FLVCR2Q9UPI3 526 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 PRELID1Q9Y255 219 aa11.72□□□□□ -0.53
HMGN1-209ENST00000463631 NDUFB4O95168 129 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
HMGN1-209ENST00000463631 ERCC8Q13216 396 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 MITD1Q8WV92 249 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 GSKIPQ9P0R6 139 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 HHLA3Q9XRX5 114 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
HMGN1-209ENST00000463631 GPX1P07203 203 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 GCSHP23434 173 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 FHL2Q14192 279 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 VWC2Q2TAL6 325 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 C12orf45Q8N5I9 185 aaPredicted RBP11.7□□□□□ -0.54
HMGN1-209ENST00000463631 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 SRRQ9GZT4 340 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 MRPL16Q9NX20 251 aaKnown RBP11.7□□□□□ -0.54
HMGN1-209ENST00000463631 BOLA1Q9Y3E2 137 aa11.7□□□□□ -0.54
HMGN1-209ENST00000463631 IGHV3-53P01767 116 aa11.69□□□□□ -0.54
HMGN1-209ENST00000463631 RPL29P47914 159 aaKnown RBP11.69□□□□□ -0.54
HMGN1-209ENST00000463631 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
HMGN1-209ENST00000463631 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
HMGN1-209ENST00000463631 SLC39A9Q9NUM3 307 aa11.69□□□□□ -0.54
HMGN1-209ENST00000463631 UQCC1Q9NVA1 299 aa11.69□□□□□ -0.54
HMGN1-209ENST00000463631 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 L7N2F9 121 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 RGS13O14921 159 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 SMR3BP02814 79 aaPredicted RBP11.68□□□□□ -0.54
HMGN1-209ENST00000463631 HIST1H1EP10412 219 aaKnown RBP11.68□□□□□ -0.54
HMGN1-209ENST00000463631 EVI2AP22794 236 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 VAMP2P63027 116 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 SPANXN2Q5MJ10 180 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 PRR9Q5T870 116 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 Q6ZSN1 163 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 WFDC10BQ8IUB3 73 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 TMEM70Q9BUB7 260 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 MRPL32Q9BYC8 188 aaKnown RBP11.68□□□□□ -0.54
HMGN1-209ENST00000463631 TP53TG3Q9ULZ0 132 aa11.68□□□□□ -0.54
HMGN1-209ENST00000463631 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 PRAF2O60831 178 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 SRIP30626 198 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 BTCP35070 178 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 TRIQKQ629K1 86 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 IQCF2Q8IXL9 164 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 ARPC5LQ9BPX5 153 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 C11orf1Q9H5F2 150 aa11.67□□□□□ -0.54
HMGN1-209ENST00000463631 TRBV7-9A0A0J9YWB2 115 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 K7EQD1 137 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 CST7O76096 145 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 INPP1P49441 399 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 CAV2P51636 162 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 ZNF415Q09FC8 603 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 BAK1Q16611 211 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 TMEM78Q5T7P6 136 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 EXOC3-AS1Q8N2X6 119 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 C10orf126Q8N4M7 172 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 NTN5Q8WTR8 489 aaPredicted RBP11.66□□□□□ -0.54
HMGN1-209ENST00000463631 C20orf85Q9H1P6 137 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 AAMDCQ9H7C9 122 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 MDFICQ9P1T7 246 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 TIMM9Q9Y5J7 89 aa11.66□□□□□ -0.54
HMGN1-209ENST00000463631 IGKV2-40A0A087WW87 121 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-209ENST00000463631 UBE2L5PA0A1B0GUS4 154 aa11.65□□□□□ -0.54
HMGN1-209ENST00000463631 IGKV2D-40P01614 121 aaPredicted RBP11.65□□□□□ -0.54
HMGN1-209ENST00000463631 PYYP10082 97 aa11.65□□□□□ -0.54
HMGN1-209ENST00000463631 ZNF846Q147U1 533 aa11.65□□□□□ -0.54
HMGN1-209ENST00000463631 CNPY1Q3B7I2 92 aa11.65□□□□□ -0.54
HMGN1-209ENST00000463631 ZNF492Q9P255 531 aa11.65□□□□□ -0.54
HMGN1-209ENST00000463631 TRGV4A0A0C4DH28 118 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 ORM1P02763 201 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 SULT1A1P50225 295 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 BCAP31P51572 246 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 BAXQ07812 192 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 Q6ZQT7 251 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 OR10G4Q8NGN3 311 aa11.64□□□□□ -0.55
HMGN1-209ENST00000463631 PCNPQ8WW12 178 aaKnown RBP11.64□□□□□ -0.55
HMGN1-209ENST00000463631 LSM5Q9Y4Y9 91 aaKnown RBP11.64□□□□□ -0.55
HMGN1-209ENST00000463631 CENPXA8MT69 81 aa11.63□□□□□ -0.55
HMGN1-209ENST00000463631 CCSO14618 274 aa11.63□□□□□ -0.55
HMGN1-209ENST00000463631 CRYGDP07320 174 aa11.63□□□□□ -0.55
HMGN1-209ENST00000463631 S100A11P31949 105 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms