RNA–Protein interactions for RNA: ENST00000461944.1

NGEF-208, Transcript of neuronal guanine nucleotide exchange factor, human

TSL 4

Gene NGEF, Length 568 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NGEF-208	ENST00000461944	PARL	Q9H300	379 aa		13.67	□□□□□ -0.22
NGEF-208	ENST00000461944		A0A0J9YX75	114 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	NPIPB6	E9PJ23	425 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	DUSP14	O95147	198 aa	Known RBP	13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	HLA-DRB4	P13762	266 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	FLI1	Q01543	452 aa	Predicted RBP	13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	PRNT	Q86SH4	94 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	STH	Q8IWL8	128 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	OR4B1	Q8NGF8	309 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	SMIM7	Q9BQ49	75 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	NDFIP1	Q9BT67	221 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	PPP1R14D	Q9NXH3	145 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	HLA-DRB4	X5D2U9	266 aa		13.66	□□□□□ -0.22
NGEF-208	ENST00000461944	FBLL1	A6NHQ2	334 aa	Known RBP	13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	IGKV3-20	P01619	116 aa		13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	S100A9	P06702	114 aa	Known RBP	13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	KRTAP10-11	P60412	298 aa		13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	TMEM183B	Q1AE95	376 aa		13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	CENPW	Q5EE01	88 aa		13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	PSG8	Q9UQ74	426 aa		13.65	□□□□□ -0.22
NGEF-208	ENST00000461944	ZNF727	A8MUV8	499 aa		13.64	□□□□□ -0.23
NGEF-208	ENST00000461944	GNG4	P50150	75 aa		13.64	□□□□□ -0.23
NGEF-208	ENST00000461944	SOHLH1	Q5JUK2	328 aa		13.64	□□□□□ -0.23
NGEF-208	ENST00000461944	C9orf47	Q6ZRZ4	202 aa		13.64	□□□□□ -0.23
NGEF-208	ENST00000461944	DNAH3	Q8TD57	4116 aa		13.64	□□□□□ -0.23
NGEF-208	ENST00000461944	ZNF138	P52744	262 aa		13.63	□□□□□ -0.23
NGEF-208	ENST00000461944	DEFB125	Q8N687	156 aa		13.63	□□□□□ -0.23
NGEF-208	ENST00000461944	ASCL2	Q99929	193 aa		13.63	□□□□□ -0.23
NGEF-208	ENST00000461944	AGPAT4-IT1	Q9H0P7	198 aa		13.63	□□□□□ -0.23
NGEF-208	ENST00000461944	C19orf73	Q9NVV2	129 aa		13.63	□□□□□ -0.23
NGEF-208	ENST00000461944		F8W036	122 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	IGLV2-11	P01706	119 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	TAS2R60	P59551	318 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	NHLRC2	Q8NBF2	726 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	LINC00477	Q96M19	166 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	SRD5A3	Q9H8P0	318 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	KLF12	Q9Y4X4	402 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	NOTCH3	Q9UM47	2321 aa		13.62	□□□□□ -0.23
NGEF-208	ENST00000461944	TMEM218	A2RU14	115 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944		C9JCJ5	164 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944		H3BMM0	161 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944	FAM74A3	Q4VXF1	159 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944	IGF2BP2-AS1	Q96M15	143 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944	ZNF492	Q9P255	531 aa		13.61	□□□□□ -0.23
NGEF-208	ENST00000461944	TRBV6-1	A0A0K0K1D8	114 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	LTA	P01374	205 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	CT45A10	P0DMU9	189 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	LEP	P41159	167 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	TRPT1	Q86TN4	253 aa	Known RBP	13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	BAGE2	Q86Y30	109 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	NIPSNAP3B	Q9BS92	247 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944	SORL1	Q92673	2214 aa		13.6	□□□□□ -0.23
NGEF-208	ENST00000461944		J3KRW8	73 aa		13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	MGST1	P10620	155 aa	Known RBP	13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	RPL35A	P18077	110 aa	Known RBP	13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	SAPCD1	Q5SSQ6	148 aa		13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	ODF3	Q96PU9	254 aa		13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	NAT8	Q9UHE5	227 aa		13.59	□□□□□ -0.23
NGEF-208	ENST00000461944	TRBV20OR9-2	A0A075B6H5	130 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	RBMY1B	A6NDE4	496 aa	Known RBP	13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	RBMY1E	A6NEQ0	496 aa	Known RBP	13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	PGPEP1L	A6NFU8	196 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	RBMY1D	P0C7P1	496 aa	Known RBP	13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	ADCYAP1	P18509	176 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	TSPO	P30536	169 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	SPINK13	Q1W4C9	94 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944		Q8N1Y9	231 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	C8orf49	Q96NF6	230 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	TUBA4B	Q9H853	241 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	ZFP30	Q9Y2G7	519 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944	LENEP	Q9Y5L5	61 aa		13.58	□□□□□ -0.24
NGEF-208	ENST00000461944		M0R2Z0	102 aa		13.57	□□□□□ -0.24
NGEF-208	ENST00000461944	FXYD7	P58549	80 aa		13.57	□□□□□ -0.24
NGEF-208	ENST00000461944	PRR27	Q6MZM9	219 aa		13.57	□□□□□ -0.24
NGEF-208	ENST00000461944	TMEM183A	Q8IXX5	376 aa		13.57	□□□□□ -0.24
NGEF-208	ENST00000461944	SEC11C	Q9BY50	192 aa		13.57	□□□□□ -0.24
NGEF-208	ENST00000461944	AGRN	O00468	2067 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	KRBOX1	C9JBD0	128 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	NUTF2	P61970	127 aa	Known RBP	13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	ADIRF	Q15847	76 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	TMEM241	Q24JQ0	296 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	SMUG1	Q53HV7	270 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	KPRP	Q5T749	579 aa	Predicted RBP	13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	SMIM12	Q96EX1	92 aa		13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.56	□□□□□ -0.24
NGEF-208	ENST00000461944	TRBV7-9	A0A0J9YWB2	115 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944		A8MTW9	85 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	GCG	P01275	180 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	GPX1	P07203	203 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	IGHV4-30-4	P0DP06	118 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	CDKN1B	P46527	198 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	AMTN	Q6UX39	209 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	TVP23C	Q96ET8	276 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	FAM19A4	Q96LR4	140 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	CLUHP3	Q96NS8	147 aa		13.55	□□□□□ -0.24
NGEF-208	ENST00000461944	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	13.54	□□□□□ -0.24
NGEF-208	ENST00000461944	CRISP2	P16562	243 aa		13.54	□□□□□ -0.24
NGEF-208	ENST00000461944	BTN1A1	Q13410	526 aa		13.54	□□□□□ -0.24
NGEF-208	ENST00000461944	MORN3	Q6PF18	240 aa	Predicted RBP	13.54	□□□□□ -0.24
NGEF-208	ENST00000461944	ZC2HC1A	Q96GY0	325 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 127.2 ms