RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 C9orf62Q8N4C0 152 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 OR11H2Q8NH07 326 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 SFT2D1Q8WV19 159 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 OVOL2Q9BRP0 275 aa9.14□□□□□ -0.95
HDAC4-207ENST00000461113 NKX6-2Q9C056 277 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-207ENST00000461113 INSP01308 110 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 SLC25A5P05141 298 aaKnown RBP9.13□□□□□ -0.95
HDAC4-207ENST00000461113 H2AFB1P0C5Y9 115 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 PPT1P50897 306 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 CD300CQ08708 224 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 ARL6IP6Q8N6S5 226 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 SLC35B3Q9H1N7 401 aa9.13□□□□□ -0.95
HDAC4-207ENST00000461113 SERTM2A0A1B0GWG4 89 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 A8MTW9 85 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 PRAC2D3DTV9 90 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 HBE1P02100 147 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 CDKN1BP46527 198 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
HDAC4-207ENST00000461113 SPINK13Q1W4C9 94 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 IGF2BP2-AS1Q96M15 143 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 RPH3ALQ9UNE2 315 aa9.12□□□□□ -0.95
HDAC4-207ENST00000461113 IGHV3OR16-12A0A075B7B8 117 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 A0A1W2PRE2 83 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 RBAKDNA6NC62 111 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 CXorf65A6NEN9 183 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 NPIPB6E9PJ23 425 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 IFNA7P01567 189 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 PMS2P11Q13670 270 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 ZNF726P1Q15940 193 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 C5orf17Q8NAS9 161 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 SUN5Q8TC36 379 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 MBD3L1Q8WWY6 194 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 KRTAP4-5Q9BYR2 181 aa9.11□□□□□ -0.95
HDAC4-207ENST00000461113 SMIM9A6NGZ8 99 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 DIRC3C9JPN6 131 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 F6UZH7 168 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 M0R2Z0 102 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 GIG44P09565 113 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-207ENST00000461113 MED14OSP0DP75 135 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 MIFP14174 115 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 FHITP49789 147 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 SULT1A2P50226 295 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 ZNF138P52744 262 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 NKX2-5P52952 324 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-207ENST00000461113 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
HDAC4-207ENST00000461113 AMTNQ6UX39 209 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 TMEM256Q8N2U0 113 aa9.1□□□□□ -0.95
HDAC4-207ENST00000461113 IGKV2-40A0A087WW87 121 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-207ENST00000461113 FBLL1A6NHQ2 334 aaKnown RBP9.09□□□□□ -0.95
HDAC4-207ENST00000461113 IGKV2D-40P01614 121 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-207ENST00000461113 CT45A10P0DMU9 189 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 PRB4P10163 310 aaPredicted RBP9.09□□□□□ -0.95
HDAC4-207ENST00000461113 UBE2G2P60604 165 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 ERCC8Q13216 396 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 CST9LP1Q5W188 147 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 GOLT1AQ6ZVE7 132 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 SSX7Q7RTT5 188 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 LINC01587Q99440 93 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 C20orf144Q9BQM9 153 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 NIPSNAP3BQ9BS92 247 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 NDFIP1Q9BT67 221 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
HDAC4-207ENST00000461113 TRAV12-2A0A075B6T6 113 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 TRBV7-9A0A0J9YWB2 115 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 A0A1B0GV50 99 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 TMEM189A5PLL7 270 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 ZNF705EA8MWA4 302 aaPredicted RBP9.08□□□□□ -0.96
HDAC4-207ENST00000461113 J3KRW8 73 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 GPX1P07203 203 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 NMBP08949 121 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 RRN3P1Q2M238 152 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 TCEAL7Q9BRU2 100 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 TMPRSS5Q9H3S3 457 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 EPDR1Q9UM22 224 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 LENEPQ9Y5L5 61 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 ARL2-SNX15V9GYD0 113 aa9.08□□□□□ -0.96
HDAC4-207ENST00000461113 NUPR2A6NF83 97 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 IFNA1P01562 189 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 BLOC1S1P78537 153 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-207ENST00000461113 ZNF705AQ6ZN79 300 aaPredicted RBP9.07□□□□□ -0.96
HDAC4-207ENST00000461113 CCDC28AQ8IWP9 274 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 CYB561D1Q8N8Q1 229 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 HIST1H2BAQ96A08 127 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 NEU1Q99519 415 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 VGLL1Q99990 258 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 ATG101Q9BSB4 218 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 PLA2G2EQ9NZK7 142 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 ZNF492Q9P255 531 aa9.07□□□□□ -0.96
HDAC4-207ENST00000461113 AGRNO00468 2067 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 TRAV1-1A0A0B4J248 108 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 A0A0J9YWU9 116 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 FAM74A7A6NL05 159 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 H7BYZ3 331 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 TCRAP04437 139 aa9.06□□□□□ -0.96
HDAC4-207ENST00000461113 RNASE4P34096 147 aaKnown RBP9.06□□□□□ -0.96
HDAC4-207ENST00000461113 C11orf68Q9H3H3 251 aaKnown RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms