RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 C5orf56Q8N8D9 126 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 CCDC140Q96MF4 163 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 VGLL1Q99990 258 aa14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 UTP20O75691 2785 aaKnown RBP14.23□□□□□ -0.13
SEMA3B-209ENST00000456560 HLA-DMBP28068 263 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 BVES-AS1Q5T3Y7 98 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 A0A087X0K7 114 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 CLPSL1A2RUU4 121 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 TAX1BP3O14907 124 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 BUB3O43684 328 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 IGFL4Q6B9Z1 124 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 PET117Q6UWS5 81 aa14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 MCRIP2Q9BUT9 160 aaKnown RBP14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 TIMM8BQ9Y5J9 83 aaPredicted RBP14.22□□□□□ -0.13
SEMA3B-209ENST00000456560 FAM208BQ5VWN6 2430 aa14.21□□□□□ -0.13
SEMA3B-209ENST00000456560 CDKN1BP46527 198 aa14.21□□□□□ -0.13
SEMA3B-209ENST00000456560 RAB9AP51151 201 aa14.21□□□□□ -0.13
SEMA3B-209ENST00000456560 LYZL1Q6UWQ5 148 aa14.21□□□□□ -0.13
SEMA3B-209ENST00000456560 SCRT2Q9NQ03 307 aa14.21□□□□□ -0.13
SEMA3B-209ENST00000456560 CSN3P07498 182 aa14.21□□□□□ -0.14
SEMA3B-209ENST00000456560 HSPB8Q9UJY1 196 aa14.21□□□□□ -0.14
SEMA3B-209ENST00000456560 GOSR1O95249 250 aa14.2□□□□□ -0.14
SEMA3B-209ENST00000456560 ZNF80P51504 273 aaPredicted RBP14.2□□□□□ -0.14
SEMA3B-209ENST00000456560 CLEC19AQ6UXS0 136 aa14.2□□□□□ -0.14
SEMA3B-209ENST00000456560 C12orf54Q6X4T0 127 aa14.2□□□□□ -0.14
SEMA3B-209ENST00000456560 MUC21A0A0G2JKD1 596 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 MUC21A0A140T8X8 626 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 MUC21Q5SSG8 566 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 EEF1AKMT3Q96AZ1 226 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 TPPP3Q9BW30 176 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 TMSB15BA0A087X1C1 80 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 CBY3A6NI87 242 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 RNF151Q2KHN1 245 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 C19orf54Q5BKX5 351 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 DEFB125Q8N687 156 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 Q8TAT8 98 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 PIFOQ8TCI5 191 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 PMCHL2Q9BQD1 86 aa14.19□□□□□ -0.14
SEMA3B-209ENST00000456560 DOPEY1Q5JWR5 2465 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 TRBV7-1A0A0A6YYK4 115 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 ZNF575Q86XF7 245 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 PSMG3-AS1Q96PY0 264 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 IGHV1-69DA0A0B4J2H0 117 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 IGHV1-69P01742 117 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 RPS20P60866 119 aaKnown RBP14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 MS4A6AQ9H2W1 248 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 U3KQK5 164 aa14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 UBR5O95071 2799 aaPredicted RBP14.18□□□□□ -0.14
SEMA3B-209ENST00000456560 TMEM213A2RRL7 107 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 BMI1P35226 326 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 SRSF2Q01130 221 aaKnown RBP14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 TMEM219Q86XT9 240 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 MOB4Q9Y3A3 225 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 IGHV3OR16-10A0A075B7F0 116 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 PRAC2D3DTV9 90 aa14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 CRIP2P52943 208 aaPredicted RBP14.17□□□□□ -0.14
SEMA3B-209ENST00000456560 IGHV4-61A0A0C4DH41 118 aa14.16□□□□□ -0.14
SEMA3B-209ENST00000456560 IGLC6P0CF74 106 aa14.16□□□□□ -0.14
SEMA3B-209ENST00000456560 U3KQE9 123 aa14.16□□□□□ -0.14
SEMA3B-209ENST00000456560 LRRK2Q5S007 2527 aa14.16□□□□□ -0.14
SEMA3B-209ENST00000456560 RBAKDNA6NC62 111 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 HIST1H1AQ02539 215 aaPredicted RBP14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 ATP5G2Q06055 141 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 SRSF1Q07955 248 aaKnown RBP eCLIP14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 ANKRD39Q53RE8 183 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 LINC01545Q5VT33 79 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 FAM104BQ5XKR9 115 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 ATP6V0BQ99437 205 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 SLC50A1Q9BRV3 221 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 PIMREGQ9BSJ6 248 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 ABCA2Q9BZC7 2435 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 TRAV41A0A0B4J266 112 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 ERCC8Q13216 396 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 AMMECR1LQ6DCA0 310 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 C10orf105Q8TEF2 133 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 MEGF9Q9H1U4 602 aa14.15□□□□□ -0.14
SEMA3B-209ENST00000456560 AKAP6Q13023 2319 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 AP5S1Q9NUS5 200 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 CSMD1Q96PZ7 3565 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 IGHV3-66A0A0C4DH42 116 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 RNF182Q8N6D2 247 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 FER1L6-AS1Q8NA97 138 aa14.14□□□□□ -0.15
SEMA3B-209ENST00000456560 TRAV8-2A0A0B4J237 113 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 CD5LO43866 347 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 BRD3OSQ6XYD6 125 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 FA2HQ7L5A8 372 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 METTL26Q96S19 204 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 CRYBG3Q68DQ2 2970 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 FABP5P3A8MUU1 101 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 D6R8Y8 96 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 AMN1Q8IY45 258 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 PRSS3P2Q8NHM4 247 aa14.13□□□□□ -0.15
SEMA3B-209ENST00000456560 IGHV3OR16-13A0A075B7E8 117 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 IGHV3-74A0A0B4J1X5 117 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 FAM223BA6NKX1 122 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 COX8AP10176 69 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 FAM223AQ8IWN6 122 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 CCL19Q99731 98 aa14.12□□□□□ -0.15
SEMA3B-209ENST00000456560 ZNF747Q9BV97 191 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms