RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 ARL2BPQ9Y2Y0 163 aa2.96□□□□□ -1.94
SBDSP1-204ENST00000453858 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 IGKV3D-20A0A0C4DH25 116 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 TRGV4A0A0C4DH28 118 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 GSTZ1O43708 216 aaPredicted RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 ATG12O94817 140 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 IL4P05112 153 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 CD2P06729 351 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 SFTA3P0C7M3 94 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 RPL5P46777 297 aaKnown RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 GTF2A1P52655 376 aaPredicted RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 NDUFV3P56181 108 aaKnown RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 TCL1AP56279 114 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 RPS11P62280 158 aaKnown RBP eCLIP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 MUC21Q5SSG8 566 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 SAMD13Q5VXD3 122 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 RNASEKQ6P5S7 137 aaKnown RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 KRTAP26-1Q6PEX3 210 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 Q6ZS49 121 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 RNF182Q8N6D2 247 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 OR8A1Q8NGG7 326 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 OR10G4Q8NGN3 311 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 GPX8Q8TED1 209 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 SLC25A38Q96DW6 304 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 ARHGAP5-AS1Q96IT6 56 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 C2orf50Q96LR7 162 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 CMSS1Q9BQ75 279 aaKnown RBP2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 SOSTQ9BQB4 213 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 LPAR5Q9H1C0 372 aa2.95□□□□□ -1.94
SBDSP1-204ENST00000453858 TRAV30A0A087WSZ9 112 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 DAPL1A0PJW8 107 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 H0Y9J4 135 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 SULT1C2O00338 296 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 S100A6P06703 90 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 PFN1P07737 140 aaKnown RBP2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 FCGR3AP08637 254 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 RPL13AP40429 203 aaKnown RBP2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 VSNL1P62760 191 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 CTAG1AP78358 180 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 HIGD2BQ4VC39 106 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 XAF1Q6GPH4 301 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 FER1L6-AS1Q8NA97 138 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 CCDC197Q8NCU1 140 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 OR51G1Q8NGK1 321 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 OR5H2Q8NGV7 314 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 MAFIPQ8WZ33 124 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 DIRC1Q969H9 104 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 GINS4Q9BRT9 223 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 TMEM59Q9BXS4 323 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 PECRQ9BY49 303 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 PARD6GQ9BYG4 376 aaPredicted RBP2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 GTSF1LQ9H1H1 148 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 PPDPFQ9H3Y8 114 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 RPP21Q9H633 154 aaKnown RBP2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 CCL28Q9NRJ3 127 aa2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 MRPL16Q9NX20 251 aaKnown RBP2.94□□□□□ -1.94
SBDSP1-204ENST00000453858 FBLL1A6NHQ2 334 aaKnown RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 APOA1P02647 267 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 TCRBP04435 133 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 STAG3L2P0CL84 134 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 RD3LP0DJH9 198 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 NFYAP23511 347 aaPredicted RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 MEOX2P50222 304 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 RHOBP62745 196 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 SUPT4H1P63272 117 aaKnown RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 COX6A2Q02221 97 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 HIST1H1AQ02539 215 aaPredicted RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 SS18Q15532 418 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 MAPRE2Q15555 327 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 KRTAP13-3Q3SY46 172 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 PRSS54Q6PEW0 395 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 ENHOQ6UWT2 76 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 LHFPL3Q86UP9 236 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 NIT1Q86X76 327 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 ACBD7Q8N6N7 88 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 ZNF680Q8NEM1 530 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 OR4D5Q8NGN0 318 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 OR1S2Q8NGQ3 325 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 OR1L4Q8NGR5 311 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 ZNF431Q8TF32 576 aaPredicted RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 FGF20Q9NP95 211 aaPredicted RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 NUDT15Q9NV35 164 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 FKBP11Q9NYL4 201 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 KLK12Q9UKR0 248 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 PRNDQ9UKY0 176 aa2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 CARHSP1Q9Y2V2 147 aaKnown RBP2.93□□□□□ -1.94
SBDSP1-204ENST00000453858 TRAV12-3A0A0B4J271 114 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 A0A1W2PPV4 95 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 UBBP0CG47 229 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 RNASE2P10153 161 aaKnown RBP2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 PSMA1P25786 263 aaKnown RBP2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 OR10J1P30954 320 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 HSPA13P48723 471 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 RAB11AP62491 216 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 MSMO1Q15800 293 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 RAB11BQ15907 218 aa2.92□□□□□ -1.94
SBDSP1-204ENST00000453858 C1orf100Q5SVJ3 147 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms