RNA–Protein interactions for RNA: ENST00000453163.6

PDCD2-204, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-204ENST00000453163 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.63■□□□□ 0.093e-7■■■□□ 16.5
PDCD2-204ENST00000453163 TRBV7-1A0A0A6YYK4 115 aa15.63■□□□□ 0.09
PDCD2-204ENST00000453163 FOXA3P55318 350 aaPredicted RBP15.63■□□□□ 0.09
PDCD2-204ENST00000453163 ARMS2P0C7Q2 107 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 SPOCK3Q9BQ16 436 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 TMEM70Q9BUB7 260 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 FAM208BQ5VWN6 2430 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 ZNF207O43670 478 aaKnown RBP15.62■□□□□ 0.09
PDCD2-204ENST00000453163 S100A7P31151 101 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 VGLL1Q99990 258 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 CLEC5AQ9NY25 188 aa15.62■□□□□ 0.09
PDCD2-204ENST00000453163 IGHV3-49A0A0A0MS15 119 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 HAX1O00165 279 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 CRXO43186 299 aaPredicted RBP15.61■□□□□ 0.09
PDCD2-204ENST00000453163 ATP5G2Q06055 141 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 H3BUX3 64 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 FAM162BQ5T6X4 162 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 TPPP3Q9BW30 176 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 PRR25Q96S07 402 aa15.61■□□□□ 0.09
PDCD2-204ENST00000453163 FBN2P35556 2912 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 A0A1B0GUT8 65 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 SH2D1AO60880 128 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 HIF1ANQ9NWT6 349 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 CSPG4Q6UVK1 2322 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 ANKRD17O75179 2603 aaKnown RBP15.6■□□□□ 0.09
PDCD2-204ENST00000453163 TMSB15BA0A087X1C1 80 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 TRGV3P03979 118 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 CRIP2P52943 208 aaPredicted RBP15.6■□□□□ 0.09
PDCD2-204ENST00000453163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 RNF182Q8N6D2 247 aa15.6■□□□□ 0.09
PDCD2-204ENST00000453163 BBC3Q96PG8 261 aaPredicted RBP15.6■□□□□ 0.09
PDCD2-204ENST00000453163 LRRK2Q5S007 2527 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 CENPEQ02224 2701 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 M0QZ24 198 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 AVPP01185 164 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 RAB9AP51151 201 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 ARL6IP6Q8N6S5 226 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 ST20Q9HBF5 79 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 A0A087X0K7 114 aa15.59■□□□□ 0.09
PDCD2-204ENST00000453163 LOC102724200A0A096LPH7 203 aaPredicted RBP15.59■□□□□ 0.09
PDCD2-204ENST00000453163 OR4C46A6NHA9 309 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 ANKRD39Q53RE8 183 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 METTL26Q96S19 204 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 POLQO75417 2590 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 FAM223BA6NKX1 122 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 PRAC2D3DTV9 90 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 SAPCD1Q5SSQ6 148 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 FAM223AQ8IWN6 122 aa15.58■□□□□ 0.08
PDCD2-204ENST00000453163 CHCHD1Q96BP2 118 aaKnown RBP15.58■□□□□ 0.08
PDCD2-204ENST00000453163 ZNF80P51504 273 aaPredicted RBP15.57■□□□□ 0.08
PDCD2-204ENST00000453163 A6NDX4 124 aa15.57■□□□□ 0.08
PDCD2-204ENST00000453163 COX8CQ7Z4L0 72 aa15.57■□□□□ 0.08
PDCD2-204ENST00000453163 IGHV1-24A0A0C4DH33 117 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 TMEM189A5PLL7 270 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 B4DSR2 109 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 SYS1-DBNDD2H3BUS1 97 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 IGF1P05019 195 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 RIGQ13278 110 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 USP9YO00507 2555 aaPredicted RBP15.56■□□□□ 0.08
PDCD2-204ENST00000453163 CDKN1BP46527 198 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 ERCC8Q13216 396 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 LINC00173Q6ZV60 143 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 TP73-AS1Q9UF72 201 aa15.56■□□□□ 0.08
PDCD2-204ENST00000453163 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.55■□□□□ 0.08
PDCD2-204ENST00000453163 TRBV12-3P01733 135 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 BLCAPP62952 87 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 Q6ZS46 218 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 IGHG2P01859 326 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 Q6AWC8 147 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 NDFIP1Q9BT67 221 aa15.55■□□□□ 0.08
PDCD2-204ENST00000453163 ZANQ9Y493 2812 aa15.54■□□□□ 0.08
PDCD2-204ENST00000453163 FBLL1A6NHQ2 334 aaKnown RBP15.54■□□□□ 0.08
PDCD2-204ENST00000453163 UBR5O95071 2799 aaPredicted RBP15.54■□□□□ 0.08
PDCD2-204ENST00000453163 ARL3P36405 182 aa15.54■□□□□ 0.08
PDCD2-204ENST00000453163 MPV17L2Q567V2 206 aa15.54■□□□□ 0.08
PDCD2-204ENST00000453163 LYZL1Q6UWQ5 148 aa15.54■□□□□ 0.08
PDCD2-204ENST00000453163 SLC50A1Q9BRV3 221 aa15.54■□□□□ 0.08
PDCD2-204ENST00000453163 PPIFP30405 207 aaKnown RBP15.53■□□□□ 0.08
PDCD2-204ENST00000453163 OR4C5Q8NGB2 326 aa15.53■□□□□ 0.08
PDCD2-204ENST00000453163 U3KQE9 123 aa15.53■□□□□ 0.08
PDCD2-204ENST00000453163 LEPROTL1O95214 131 aa15.53■□□□□ 0.08
PDCD2-204ENST00000453163 TRAV8-2A0A0B4J237 113 aa15.52■□□□□ 0.08
PDCD2-204ENST00000453163 hDV102S1A0JD36 115 aa15.52■□□□□ 0.08
PDCD2-204ENST00000453163 GATD1Q8NB37 220 aa15.52■□□□□ 0.08
PDCD2-204ENST00000453163 A1L4Q6 167 aa15.52■□□□□ 0.07
PDCD2-204ENST00000453163 TAX1BP3O14907 124 aa15.52■□□□□ 0.07
PDCD2-204ENST00000453163 UNQ9165/PRO28630Q6UXU0 137 aa15.52■□□□□ 0.07
PDCD2-204ENST00000453163 C8orf86Q6ZUL3 223 aa15.52■□□□□ 0.07
PDCD2-204ENST00000453163 ATP6V0BQ99437 205 aa15.52■□□□□ 0.07
PDCD2-204ENST00000453163 MUC21A0A0G2JKD1 596 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 MUC21A0A140T8X8 626 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 IGHV3-11P01762 117 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 DSCR9P59020 149 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 MUC21Q5SSG8 566 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 KLK15Q9H2R5 256 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 TMEM213A2RRL7 107 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 ZNF138P52744 262 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 BVES-AS1Q5T3Y7 98 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 LCNL1Q6ZST4 164 aa15.51■□□□□ 0.07
PDCD2-204ENST00000453163 TMEM191AQ9H0A3 160 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms