RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 TRAV9-2A0A087WT02 112 aa8.8□□□□□ -1
DDR1-239ENST00000452441 GATA1P15976 413 aaPredicted RBP8.8□□□□□ -1
DDR1-239ENST00000452441 RPL7P18124 248 aaKnown RBP8.8□□□□□ -1
DDR1-239ENST00000452441 PRTN3P24158 256 aa8.8□□□□□ -1
DDR1-239ENST00000452441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.8□□□□□ -1
DDR1-239ENST00000452441 TRGV9Q99603 122 aa8.8□□□□□ -1
DDR1-239ENST00000452441 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
DDR1-239ENST00000452441 IGHV3OR16-12A0A075B7B8 117 aa8.8□□□□□ -1
DDR1-239ENST00000452441 TRAV26-2A0A0B4J265 109 aa8.8□□□□□ -1
DDR1-239ENST00000452441 PSMB11A5LHX3 300 aa8.8□□□□□ -1
DDR1-239ENST00000452441 TMEM78Q5T7P6 136 aa8.8□□□□□ -1
DDR1-239ENST00000452441 KAAG1Q9UBP8 84 aa8.8□□□□□ -1
DDR1-239ENST00000452441 DCHS2Q6V1P9 2916 aa8.8□□□□□ -1
DDR1-239ENST00000452441 VWC2LB2RUY7 222 aa8.8□□□□□ -1
DDR1-239ENST00000452441 FAM106AQ4KMX7 169 aa8.8□□□□□ -1
DDR1-239ENST00000452441 IL17RELQ6ZVW7 336 aa8.8□□□□□ -1
DDR1-239ENST00000452441 TNFRSF14Q92956 283 aa8.8□□□□□ -1
DDR1-239ENST00000452441 CRYBG3Q68DQ2 2970 aa8.8□□□□□ -1
DDR1-239ENST00000452441 ZFP36P26651 326 aaKnown RBP8.8□□□□□ -1
DDR1-239ENST00000452441 HIST1H1AQ02539 215 aaPredicted RBP8.8□□□□□ -1
DDR1-239ENST00000452441 OR10AG1Q8NH19 301 aa8.8□□□□□ -1
DDR1-239ENST00000452441 LINC01548A6NM66 108 aa8.79□□□□□ -1
DDR1-239ENST00000452441 RPL24P83731 157 aaKnown RBP8.79□□□□□ -1
DDR1-239ENST00000452441 FER1L6-AS1Q8NA97 138 aa8.79□□□□□ -1
DDR1-239ENST00000452441 IGHV1-24A0A0C4DH33 117 aa8.79□□□□□ -1
DDR1-239ENST00000452441 SH2D1AO60880 128 aa8.79□□□□□ -1
DDR1-239ENST00000452441 TMEM95Q3KNT9 176 aa8.79□□□□□ -1
DDR1-239ENST00000452441 MBD6Q96DN6 1003 aa8.79□□□□□ -1
DDR1-239ENST00000452441 TTTY13Q9BZ97 58 aa8.79□□□□□ -1
DDR1-239ENST00000452441 NCOR1P1Q9H4R4 102 aa8.79□□□□□ -1
DDR1-239ENST00000452441 LDLRAD2Q5SZI1 272 aa8.79□□□□□ -1
DDR1-239ENST00000452441 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
DDR1-239ENST00000452441 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
DDR1-239ENST00000452441 ZNF491Q8N8L2 437 aa8.79□□□□□ -1
DDR1-239ENST00000452441 SYS1-DBNDD2H3BUS1 97 aa8.78□□□□□ -1
DDR1-239ENST00000452441 ATP6V0E1O15342 81 aa8.78□□□□□ -1
DDR1-239ENST00000452441 CCL25O15444 150 aa8.78□□□□□ -1
DDR1-239ENST00000452441 EMP1P54849 157 aa8.78□□□□□ -1
DDR1-239ENST00000452441 DLX6P56179 175 aa8.78□□□□□ -1
DDR1-239ENST00000452441 DYNAPQ8N1N2 210 aa8.78□□□□□ -1
DDR1-239ENST00000452441 ATP5G2Q06055 141 aa8.78□□□□□ -1
DDR1-239ENST00000452441 METTL26Q96S19 204 aa8.78□□□□□ -1
DDR1-239ENST00000452441 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
DDR1-239ENST00000452441 TRBV19A0A075B6N1 114 aa8.78□□□□□ -1
DDR1-239ENST00000452441 RNF223E7ERA6 249 aa8.78□□□□□ -1
DDR1-239ENST00000452441 TOMM40O96008 361 aa8.78□□□□□ -1
DDR1-239ENST00000452441 RASL11AQ6T310 242 aa8.78□□□□□ -1
DDR1-239ENST00000452441 SPATA12Q7Z6I5 190 aa8.78□□□□□ -1
DDR1-239ENST00000452441 LINC00311Q8N616 119 aa8.78□□□□□ -1
DDR1-239ENST00000452441 WIPF2Q8TF74 440 aaPredicted RBP8.78□□□□□ -1
DDR1-239ENST00000452441 DPF1Q92782 380 aa8.78□□□□□ -1
DDR1-239ENST00000452441 H3BVH4 76 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 C2orf70A6NJV1 201 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 K7EIM0 57 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 IGLV1-47P01700 117 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 FAM162BQ5T6X4 162 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 AMMECR1LQ6DCA0 310 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 FOXC2Q99958 501 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 NDUFA3O95167 84 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 LOXL1Q08397 574 aaPredicted RBP8.77□□□□□ -1.01
DDR1-239ENST00000452441 PSG3Q16557 428 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 ZNF502Q8TBZ5 544 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 ZNF414Q96IQ9 312 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 JKAMPQ9P055 326 aa8.77□□□□□ -1.01
DDR1-239ENST00000452441 USP24Q9UPU5 2620 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 TRAV30A0A087WSZ9 112 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 F6UB75 175 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 GP9P14770 177 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 LEPP41159 167 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 ORMDL3Q8N138 153 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 TEX22C9J3V5 150 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 IGHV4-61A0A0C4DH41 118 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 PRAC2D3DTV9 90 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 NPFFO15130 113 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 MTURNQ8N3F0 131 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 SHANK2-AS3Q9BTD1 123 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 MRPS16Q9Y3D3 137 aaKnown RBP8.76□□□□□ -1.01
DDR1-239ENST00000452441 COX11Q9Y6N1 276 aa8.76□□□□□ -1.01
DDR1-239ENST00000452441 HELZ2Q9BYK8 2649 aaKnown RBP8.75□□□□□ -1.01
DDR1-239ENST00000452441 ATP5L2Q7Z4Y8 100 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 H3BUT2 72 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 RNASE4P34096 147 aaKnown RBP8.75□□□□□ -1.01
DDR1-239ENST00000452441 KLF5Q13887 457 aaPredicted RBP8.75□□□□□ -1.01
DDR1-239ENST00000452441 GTSCR1Q86UQ5 136 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 RNASE8Q8TDE3 154 aaKnown RBP8.75□□□□□ -1.01
DDR1-239ENST00000452441 EEF1AKMT3Q96AZ1 226 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 URB1-AS1Q96HZ7 61 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 ZNF562Q6V9R5 426 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 LINC00477Q96M19 166 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 LINC00574Q9H8X3 128 aa8.75□□□□□ -1.01
DDR1-239ENST00000452441 BEX4Q9NWD9 120 aaPredicted RBP8.75□□□□□ -1.01
DDR1-239ENST00000452441 A0A1W2PPR1 153 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 BMI1P35226 326 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 NEGR1Q7Z3B1 354 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 THAP8Q8NA92 274 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 PHLDA3Q9Y5J5 127 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 I3L2K1 104 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 M0R1W7 72 aa8.74□□□□□ -1.01
DDR1-239ENST00000452441 SMIM17P0DL12 118 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 159.1 ms