RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-223	ENST00000449864	C7orf71	A4D174	169 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	SNURFL	B1AK76	121 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864		F5H768	121 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	ATP5G1	P05496	136 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	CSN1S1	P47710	185 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	ATP5G3	P48201	142 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	ZNF266	Q14584	549 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	POM121L12	Q8N7R1	296 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	PYGO2	Q9BRQ0	406 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	AGPAT4-IT1	Q9H0P7	198 aa		11.18	□□□□□ -0.62
HDLBP-223	ENST00000449864	GPX1	P07203	203 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	M6PR	P20645	277 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	RAN	P62826	216 aa	Known RBP	11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	BTN1A1	Q13410	526 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	C9orf47	Q6ZRZ4	202 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	ASB13	Q8WXK3	278 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	ZNF503	Q96F45	646 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864		Q9H3A6	140 aa		11.17	□□□□□ -0.62
HDLBP-223	ENST00000449864	CBY3	A6NI87	242 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	KLLN	B2CW77	178 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	GIP	P09681	153 aa	Predicted RBP	11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	RNASE4	P34096	147 aa	Known RBP	11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	RAB2A	P61019	212 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	RGS21	Q2M5E4	152 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	LYPD1	Q8N2G4	141 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	C15orf53	Q8NAA6	179 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	HSD17B11	Q8NBQ5	300 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	AQP10	Q96PS8	301 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	VGLL1	Q99990	258 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	KMT2A	Q03164	3969 aa		11.16	□□□□□ -0.62
HDLBP-223	ENST00000449864	EIF3G	O75821	320 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
HDLBP-223	ENST00000449864	CRISP2	P16562	243 aa		11.15	□□□□□ -0.62
HDLBP-223	ENST00000449864	CD300C	Q08708	224 aa		11.15	□□□□□ -0.62
HDLBP-223	ENST00000449864		Q8TAT8	98 aa		11.15	□□□□□ -0.62
HDLBP-223	ENST00000449864	FAM19A4	Q96LR4	140 aa		11.15	□□□□□ -0.62
HDLBP-223	ENST00000449864	GAGE12B	A1L429	117 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	GAGE7	O76087	117 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	NMB	P08949	121 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	GAGE12F	P0CL80	117 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	GAGE12G	P0CL81	117 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	GAGE12I	P0CL82	117 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	ZNF138	P52744	262 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	PQLC2	Q6ZP29	291 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	ZNF680	Q8NEM1	530 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR10G4	Q8NGN3	311 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR10G9	Q8NGN4	311 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR10G7	Q8NGN6	311 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	ZNF492	Q9P255	531 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	RPH3AL	Q9UNE2	315 aa		11.14	□□□□□ -0.63
HDLBP-223	ENST00000449864	FXYD6-FXYD2	A0A087WZ82	144 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	RBAKDN	A6NC62	111 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	RGS13	O14921	159 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	FAM74A1	Q5RGS3	127 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	EIF4E3	Q8N5X7	224 aa	Known RBP	11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	CMTM2	Q8TAZ6	248 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	RXFP4	Q8TDU9	374 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	HYLS1	Q96M11	299 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	OTOR	Q9NRC9	128 aa		11.13	□□□□□ -0.63
HDLBP-223	ENST00000449864	HMGB3	O15347	200 aa	Known RBP	11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	NUDT3	O95989	172 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	CDC34	P49427	236 aa	Predicted RBP	11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	RNF212	Q495C1	297 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864		Q5BKY6	102 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	PRR9	Q5T870	116 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	ZFAND2A	Q8N6M9	145 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR2G3	Q8NGZ4	309 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	ATG101	Q9BSB4	218 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	PSMG3	Q9BT73	122 aa	Predicted RBP	11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	VPS13D	Q5THJ4	4388 aa		11.12	□□□□□ -0.63
HDLBP-223	ENST00000449864	TRBV7-9	A0A0J9YWB2	115 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	DIRC3	C9JPN6	131 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	ZNF324	O75467	553 aa	Predicted RBP	11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	ARL14EPL	P0DKL9	152 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	ATP6V0C	P27449	155 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR2T35	Q8NGX2	323 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	ARPC5L	Q9BPX5	153 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	LINC00467	Q9BRT7	94 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	GSN-AS1	Q9NRJ2	163 aa		11.11	□□□□□ -0.63
HDLBP-223	ENST00000449864	IGLV2-18	A0A075B6J9	118 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	BORCS7-ASMT	A0A0B4J1R7	106 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	PGP	A6NDG6	321 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864		M0R2N4	97 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	MB	P02144	154 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	DAZ2	Q13117	558 aa	Known RBP	11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	OR5I1	Q13606	314 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	ANXA2R	Q3ZCQ2	193 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864		Q6ZTI0	123 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	LINC00612	Q8N6U2	182 aa		11.1	□□□□□ -0.63
HDLBP-223	ENST00000449864	DNAH6	Q9C0G6	4158 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	TRGV2	A0A075B6R0	118 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	IGHV1OR15-1	A0A075B7D0	117 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	SERF2	P84101	59 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	C11orf72	Q8NBR9	251 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	SH3BGRL3	Q9H299	93 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	TMPRSS5	Q9H3S3	457 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	TNFSF18	Q9UNG2	199 aa		11.09	□□□□□ -0.63
HDLBP-223	ENST00000449864	BIRC6	Q9NR09	4857 aa		11.08	□□□□□ -0.64
HDLBP-223	ENST00000449864	TRGV1	A0A0A0MS02	117 aa		11.08	□□□□□ -0.64
HDLBP-223	ENST00000449864	RNF222	A6NCQ9	220 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms