RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 TRBV19A0A075B6N1 114 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 A0A0A6YYH2 397 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 A6NJ64 397 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 TFF1P04155 84 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 NFYBP25208 207 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 ERP29P30040 261 aaKnown RBP-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 SPRR2BP35325 72 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 MT4P47944 62 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 KLKP1Q107X0 134 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 IQCJQ1A5X6 159 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 KRTAP20-1Q3LI63 56 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 GOLT1AQ6ZVE7 132 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 DDI1Q8WTU0 396 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 MRPS26Q9BYN8 205 aaKnown RBP-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 USE1Q9NZ43 259 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 MRPL36Q9P0J6 103 aaKnown RBP-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 TRPM1Q7Z4N2 1603 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 APC2O95996 2303 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 FMN1Q68DA7 1419 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 MAP1AP78559 2803 aaPredicted RBP-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 ATG2AQ2TAZ0 1938 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 MYO7AQ13402 2215 aa-0.58□□□□□ -2.5
SNHG3-203ENST00000447507 VWFP04275 2813 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 KIAA1549LQ6ZVL6 1849 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 CDK12Q9NYV4 1490 aaPredicted RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 CHD6Q8TD26 2715 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 GVQW2A0A096LPI5 108 aaPredicted RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 TRAV5A0A0B4J249 113 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 C3orf85A0A1B0GTC6 90 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 FAM159BA6NKW6 160 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 CDC42EP2O14613 210 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 GGCTO75223 188 aaKnown RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 BANF1O75531 89 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 GYPBP06028 91 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 IL7P13232 177 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 TAF1AQ15573 450 aaPredicted RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 SNCBQ16143 134 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 OTUD6BQ8N6M0 293 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 FAM216BQ8N7L0 139 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 BORCS7Q96B45 105 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 ISOC1Q96CN7 298 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 TEX37Q96LM6 180 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 Q96NJ1 140 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 ENY2Q9NPA8 101 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 BIN3Q9NQY0 253 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 F5P12259 2224 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 FGD6Q6ZV73 1430 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 NISCHQ9Y2I1 1504 aa-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 PPRC1Q5VV67 1664 aaKnown RBP-0.59□□□□□ -2.5
SNHG3-203ENST00000447507 MED13LQ71F56 2210 aa-0.6□□□□□ -2.5
SNHG3-203ENST00000447507 NHSL1Q5SYE7 1610 aa-0.6□□□□□ -2.5
SNHG3-203ENST00000447507 BIVM-ERCC5R4GMW8 1640 aa-0.6□□□□□ -2.5
SNHG3-203ENST00000447507 MAP1BP46821 2468 aaKnown RBP-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 ZNF292O60281 2723 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 DOPEY2Q9Y3R5 2298 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 A0A087WTM6 91 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 HIGD1CA8MV81 97 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 C9JAW5 83 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 F2Z2F3 143 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 HMGB3O15347 200 aaKnown RBP-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 CST7O76096 145 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 IGF2P01344 180 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 RPS17P08708 135 aaKnown RBP-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 CYBAP13498 195 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 H3F3AP84243 136 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 WFDC2Q14508 124 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 CCDC122Q5T0U0 273 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 LYPD5Q6UWN5 251 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 GRPEL2Q8TAA5 225 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 ATP6V1G3Q96LB4 118 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 AP1S3Q96PC3 154 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 OR4C12Q96R67 309 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 DSCR8Q96T75 97 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 EFCAB11Q9BUY7 163 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 TRIM4Q9C037 500 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 ATP6V1DQ9Y5K8 247 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 USP54Q70EL1 1684 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 STARD9Q9P2P6 4700 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 MAP3K5Q99683 1374 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 DLEC1Q9Y238 1755 aa-0.6□□□□□ -2.51
SNHG3-203ENST00000447507 NBEAL2Q6ZNJ1 2754 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 VIRMAQ69YN4 1812 aaKnown RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 BLMP54132 1417 aaPredicted RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 ACANP16112 2415 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 ZNF815PA8K554 130 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 M0R036 132 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 M0R3E3 92 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 LYRM1O43325 122 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TPST1O60507 370 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 HIST1H2BKO60814 126 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 IFNA7P01567 189 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 MT-ND6P03923 174 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TRGC2P03986 189 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 TCRBP04435 133 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 HIST1H2BJP06899 126 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 OMPP47874 163 aa-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 ELOF1P60002 83 aaKnown RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 LSM6P62312 80 aaKnown RBP-0.61□□□□□ -2.51
SNHG3-203ENST00000447507 EMX2Q04743 252 aa-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms