RNA–Protein interactions for RNA: ENST00000440375.1

PDGFB-203, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-203ENST00000440375 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
PDGFB-203ENST00000440375 MED28Q9H204 178 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 LINC00588Q9Y4M8 146 aa8.33□□□□□ -1.08
PDGFB-203ENST00000440375 E5RGE8 158 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 FAM3BP58499 235 aaPredicted RBP8.32□□□□□ -1.08
PDGFB-203ENST00000440375 CYCSP99999 105 aaKnown RBP8.32□□□□□ -1.08
PDGFB-203ENST00000440375 CD300CQ08708 224 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 PDE6HQ13956 83 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 PRR9Q5T870 116 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 C1orf134Q5TEV5 83 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 Q6ZTI0 123 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 CCDC28AQ8IWP9 274 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 FAM19A4Q96LR4 140 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 AGPAT4-IT1Q9H0P7 198 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 TIMM9Q9Y5J7 89 aa8.32□□□□□ -1.08
PDGFB-203ENST00000440375 TRAV26-1A0A087WT03 109 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 A0A0J9YY99 117 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 C7orf71A4D174 169 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 KLLNB2CW77 178 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 RLN2P04090 185 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 OR10J4P0C629 311 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 OR5I1Q13606 314 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 ICAM4Q14773 271 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 FAM122CQ6P4D5 195 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 Q6ZQT7 251 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 C11orf72Q8NBR9 251 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 PPP1R1CQ8WVI7 109 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 PHYHIPLQ96FC7 376 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 VGLL1Q99990 258 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 PYGO2Q9BRQ0 406 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 WDR61Q9GZS3 305 aaKnown RBP8.31□□□□□ -1.08
PDGFB-203ENST00000440375 SLC25A31Q9H0C2 315 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 TMPRSS5Q9H3S3 457 aa8.31□□□□□ -1.08
PDGFB-203ENST00000440375 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 SNURFLB1AK76 121 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 ZNF324O75467 553 aaPredicted RBP8.3□□□□□ -1.08
PDGFB-203ENST00000440375 MPC2O95563 127 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 SLC25A5P05141 298 aaKnown RBP8.3□□□□□ -1.08
PDGFB-203ENST00000440375 M6PRP20645 277 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 RNASE4P34096 147 aaKnown RBP8.3□□□□□ -1.08
PDGFB-203ENST00000440375 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 ZFAND2AQ8N6M9 145 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 FXYD5Q96DB9 178 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 ZNF503Q96F45 646 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 GSN-AS1Q9NRJ2 163 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 PRELID1Q9Y255 219 aa8.3□□□□□ -1.08
PDGFB-203ENST00000440375 EIF3GO75821 320 aaKnown RBP eCLIP8.29□□□□□ -1.08
PDGFB-203ENST00000440375 NBEAP1P0C6P0 100 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 CRISP2P16562 243 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 CCL18P55774 89 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 TNP2Q05952 138 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 DAZ2Q13117 558 aaKnown RBP8.29□□□□□ -1.08
PDGFB-203ENST00000440375 SOHLH1Q5JUK2 328 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 C9orf47Q6ZRZ4 202 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 SSX7Q7RTT5 188 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 Q8TAT8 98 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 RXFP4Q8TDU9 374 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 GNPNAT1Q96EK6 184 aaPredicted RBP8.29□□□□□ -1.08
PDGFB-203ENST00000440375 ATP5SQ99766 215 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 KRTAP1-5Q9BYS1 174 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 OR51M1Q9H341 326 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 AAMDCQ9H7C9 122 aa8.29□□□□□ -1.08
PDGFB-203ENST00000440375 RYR1P21817 5038 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 LINC00477Q96M19 166 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 PAXXQ9BUH6 204 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 MRPL32Q9BYC8 188 aaKnown RBP8.28□□□□□ -1.08
PDGFB-203ENST00000440375 SMIM3Q9BZL3 60 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 MBD2Q9UBB5 411 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 TP53TG3Q9ULZ0 132 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 FUT9Q9Y231 359 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 HSPB11Q9Y547 144 aa8.28□□□□□ -1.08
PDGFB-203ENST00000440375 TRGV1A0A0A0MS02 117 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 OR7C2O60412 319 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 PET100P0DJ07 73 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 MED14OSP0DP75 135 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 FFAR4Q5NUL3 377 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 TMEM78Q5T7P6 136 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 C6orf223Q8N319 242 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 EIF4E3Q8N5X7 224 aaKnown RBP8.27□□□□□ -1.09
PDGFB-203ENST00000440375 ZNF680Q8NEM1 530 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 VSIG2Q96IQ7 327 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 LINC00467Q9BRT7 94 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 KCNIP2Q9NS61 270 aa8.27□□□□□ -1.09
PDGFB-203ENST00000440375 TRGV2A0A075B6R0 118 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 GPX1P07203 203 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 GIPP09681 153 aaPredicted RBP8.26□□□□□ -1.09
PDGFB-203ENST00000440375 TCL1AP56279 114 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 UBE2L3P68036 154 aaKnown RBP8.26□□□□□ -1.09
PDGFB-203ENST00000440375 ESRGQ1W209 222 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 ANXA2RQ3ZCQ2 193 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 Q5BKY6 102 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 WFDC1Q9HC57 220 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 ZNF492Q9P255 531 aa8.26□□□□□ -1.09
PDGFB-203ENST00000440375 HSPG2P98160 4391 aa8.25□□□□□ -1.09
PDGFB-203ENST00000440375 C17orf112F2Z3M2 114 aa8.25□□□□□ -1.09
PDGFB-203ENST00000440375 SPINK4O60575 86 aa8.25□□□□□ -1.09
PDGFB-203ENST00000440375 NMBP08949 121 aa8.25□□□□□ -1.09
PDGFB-203ENST00000440375 RPL12P30050 165 aaKnown RBP8.25□□□□□ -1.09
PDGFB-203ENST00000440375 ZNF138P52744 262 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms