RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 LINC00467Q9BRT7 94 aa14.36□□□□□ -0.11
CPNE1-219ENST00000440240 MRPS16Q9Y3D3 137 aaKnown RBP14.36□□□□□ -0.11
CPNE1-219ENST00000440240 IL15RAQ13261 267 aa14.35□□□□□ -0.11
CPNE1-219ENST00000440240 TMPRSS5Q9H3S3 457 aa14.35□□□□□ -0.11
CPNE1-219ENST00000440240 AAMDCQ9H7C9 122 aa14.35□□□□□ -0.11
CPNE1-219ENST00000440240 GSN-AS1Q9NRJ2 163 aa14.35□□□□□ -0.11
CPNE1-219ENST00000440240 IGSF23A1L1A6 192 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 KLLNB2CW77 178 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 ZNF324O75467 553 aaPredicted RBP14.34□□□□□ -0.11
CPNE1-219ENST00000440240 NDUFB4O95168 129 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 H2AFB2P0C5Z0 115 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 FGF7P21781 194 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 ERCC8Q13216 396 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 RAB32Q13637 225 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 ANXA2RQ3ZCQ2 193 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 SPATA12Q7Z6I5 190 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 KRTAP1-5Q9BYS1 174 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 AGPAT4-IT1Q9H0P7 198 aa14.34□□□□□ -0.11
CPNE1-219ENST00000440240 NMBP08949 121 aa14.33□□□□□ -0.12
CPNE1-219ENST00000440240 EIF4E3Q8N5X7 224 aaKnown RBP14.33□□□□□ -0.12
CPNE1-219ENST00000440240 MAPKAPK5-AS1Q8N8E1 139 aa14.33□□□□□ -0.12
CPNE1-219ENST00000440240 C11orf72Q8NBR9 251 aa14.33□□□□□ -0.12
CPNE1-219ENST00000440240 FAM19A4Q96LR4 140 aa14.33□□□□□ -0.12
CPNE1-219ENST00000440240 GPX1P07203 203 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 CRISP2P16562 243 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 RNASE4P34096 147 aaKnown RBP14.32□□□□□ -0.12
CPNE1-219ENST00000440240 C9orf47Q6ZRZ4 202 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 BLNKQ8WV28 456 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 VSIG2Q96IQ7 327 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 GPN1Q9HCN4 374 aaPredicted RBP14.32□□□□□ -0.12
CPNE1-219ENST00000440240 NDUFA13Q9P0J0 144 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 FUT9Q9Y231 359 aa14.32□□□□□ -0.12
CPNE1-219ENST00000440240 A0A096LPF7 62 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 TRGV1A0A0A0MS02 117 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 PYYP10082 97 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 CD300CQ08708 224 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 EXOC3-AS1Q8N2X6 119 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 CCDC32Q9BV29 185 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 NPCDR1Q9BY65 106 aa14.31□□□□□ -0.12
CPNE1-219ENST00000440240 FAM240BA0A1B0GVZ2 78 aa14.3□□□□□ -0.12
CPNE1-219ENST00000440240 BTN1A1Q13410 526 aa14.3□□□□□ -0.12
CPNE1-219ENST00000440240 ICAM4Q14773 271 aa14.3□□□□□ -0.12
CPNE1-219ENST00000440240 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
CPNE1-219ENST00000440240 TMEM78Q5T7P6 136 aa14.3□□□□□ -0.12
CPNE1-219ENST00000440240 NBEAP1P0C6P0 100 aa14.29□□□□□ -0.12
CPNE1-219ENST00000440240 TCL1AP56279 114 aa14.29□□□□□ -0.12
CPNE1-219ENST00000440240 GCSAMLQ5JQS6 135 aa14.29□□□□□ -0.12
CPNE1-219ENST00000440240 KLF12Q9Y4X4 402 aa14.29□□□□□ -0.12
CPNE1-219ENST00000440240 DNAH5Q8TE73 4624 aa14.28□□□□□ -0.12
CPNE1-219ENST00000440240 RGS13O14921 159 aa14.28□□□□□ -0.12
CPNE1-219ENST00000440240 SPINK4O60575 86 aa14.28□□□□□ -0.12
CPNE1-219ENST00000440240 MZT2BQ6NZ67 158 aa14.28□□□□□ -0.12
CPNE1-219ENST00000440240 SLC25A2Q9BXI2 301 aa14.28□□□□□ -0.12
CPNE1-219ENST00000440240 SIVA1O15304 175 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 PAX4O43316 350 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 NHLH2Q02577 135 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 SLAQ13239 276 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 FAM122CQ6P4D5 195 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 OR5C1Q8NGR4 320 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 ST6GAL2Q96JF0 529 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 FAM167A-AS1Q96KT0 104 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 SLC25A31Q9H0C2 315 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 OR51M1Q9H341 326 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 ZNF492Q9P255 531 aa14.27□□□□□ -0.13
CPNE1-219ENST00000440240 IGHV1OR15-1A0A075B7D0 117 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 IGKV2-40A0A087WW87 121 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-219ENST00000440240 IGKV2D-40P01614 121 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-219ENST00000440240 Q8N1X5 172 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 ZFAND2AQ8N6M9 145 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 THAP6Q8TBB0 222 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 VGLL1Q99990 258 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 KCNIP2Q9NS61 270 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 PRO0255Q9UI72 69 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 ICOSQ9Y6W8 199 aa14.26□□□□□ -0.13
CPNE1-219ENST00000440240 TRBV7-9A0A0J9YWB2 115 aa14.25□□□□□ -0.13
CPNE1-219ENST00000440240 E5RGE8 158 aa14.25□□□□□ -0.13
CPNE1-219ENST00000440240 KRTAP10-2P60368 255 aa14.25□□□□□ -0.13
CPNE1-219ENST00000440240 MIR17HGQ75NE6 70 aa14.25□□□□□ -0.13
CPNE1-219ENST00000440240 ARPC5LQ9BPX5 153 aa14.25□□□□□ -0.13
CPNE1-219ENST00000440240 APOBP04114 4563 aaKnown RBP14.25□□□□□ -0.13
CPNE1-219ENST00000440240 ZNF138P52744 262 aa14.24□□□□□ -0.13
CPNE1-219ENST00000440240 LINC00315P59091 139 aa14.24□□□□□ -0.13
CPNE1-219ENST00000440240 LINC00299Q6ZSB3 139 aa14.24□□□□□ -0.13
CPNE1-219ENST00000440240 PAXXQ9BUH6 204 aa14.24□□□□□ -0.13
CPNE1-219ENST00000440240 MRPL32Q9BYC8 188 aaKnown RBP14.24□□□□□ -0.13
CPNE1-219ENST00000440240 TP53TG3Q9ULZ0 132 aa14.24□□□□□ -0.13
CPNE1-219ENST00000440240 SCRT2Q9NQ03 307 aa14.23□□□□□ -0.13
CPNE1-219ENST00000440240 HHLA3Q9XRX5 114 aa14.23□□□□□ -0.13
CPNE1-219ENST00000440240 IGHV3-53P01767 116 aa14.22□□□□□ -0.13
CPNE1-219ENST00000440240 CSN1S1P47710 185 aa14.22□□□□□ -0.13
CPNE1-219ENST00000440240 MRPL23Q16540 153 aaKnown RBP14.22□□□□□ -0.13
CPNE1-219ENST00000440240 PRR9Q5T870 116 aa14.22□□□□□ -0.13
CPNE1-219ENST00000440240 FXYD5Q96DB9 178 aa14.22□□□□□ -0.13
CPNE1-219ENST00000440240 NMES1Q9C002 83 aa14.22□□□□□ -0.13
CPNE1-219ENST00000440240 WDR61Q9GZS3 305 aaKnown RBP14.22□□□□□ -0.13
CPNE1-219ENST00000440240 MRPL16Q9NX20 251 aaKnown RBP14.22□□□□□ -0.13
CPNE1-219ENST00000440240 C17orf112F2Z3M2 114 aa14.21□□□□□ -0.13
CPNE1-219ENST00000440240 NXPH4O95158 308 aa14.21□□□□□ -0.13
CPNE1-219ENST00000440240 OR10J4P0C629 311 aa14.21□□□□□ -0.13
CPNE1-219ENST00000440240 CRYBA4P53673 196 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms