RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RABAC1Q9UI14 185 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 RAXQ9Y2V3 346 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 IGHV3OR16-8A0A075B7F1 116 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 A0A1W2PPM0 123 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 NDUFA3O95167 84 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 ARMS2P0C7Q2 107 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 C5orf64Q2M2E5 130 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 NEGR1Q7Z3B1 354 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 SCRT2Q9NQ03 307 aa8.16□□□□□ -1.1
CLSTN1-203ENST00000435891 ODF3BA8MYP8 253 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 SHISA2Q6UWI4 295 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 ZNF414Q96IQ9 312 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 C8orf49Q96NF6 230 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 ITPR1Q14643 2758 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 IGHV1-24A0A0C4DH33 117 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 SMIM17P0DL12 118 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 NPBQ8NG41 125 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 RAB1BQ9H0U4 201 aa8.15□□□□□ -1.1
CLSTN1-203ENST00000435891 NCBP2LA6PVI3 153 aaKnown RBP8.15□□□□□ -1.11
CLSTN1-203ENST00000435891 WFDC2Q14508 124 aa8.15□□□□□ -1.11
CLSTN1-203ENST00000435891 NEU4Q8WWR8 484 aaPredicted RBP8.15□□□□□ -1.11
CLSTN1-203ENST00000435891 GFRA4Q9GZZ7 299 aa8.15□□□□□ -1.11
CLSTN1-203ENST00000435891 PSG8Q9UQ74 426 aa8.15□□□□□ -1.11
CLSTN1-203ENST00000435891 IGLV11-55A0A075B6I3 123 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 IGHV3-35A0A0C4DH35 117 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 SMIM13P0DJ93 91 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 ZFP36P26651 326 aaKnown RBP8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 C11orf71Q6IPW1 123 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 SMPXQ9UHP9 88 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 WI2-2373I1.2A0A1W2PRP0 233 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 SCGB2A1O75556 95 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 PRTN3P24158 256 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 HERV-K104P63124 156 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 IGFL4Q6B9Z1 124 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 ARPC1AQ92747 370 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 SPINK8P0C7L1 97 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 ANXA2RQ3ZCQ2 193 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 MS4A6AQ9H2W1 248 aa8.14□□□□□ -1.11
CLSTN1-203ENST00000435891 COX8AP10176 69 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 VMO1Q7Z5L0 202 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 PRSS3P2Q8NHM4 247 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 B5MCH6 92 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 K7EMI3 77 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 HAX1O00165 279 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 TMEM75Q8N9X5 138 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 TIMD4Q96H15 378 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 C1RLQ9NZP8 487 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 SOX21Q9Y651 276 aaPredicted RBP8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 TMSB15BA0A087X1C1 80 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 K7ERJ3 54 aa8.13□□□□□ -1.11
CLSTN1-203ENST00000435891 PPIFP30405 207 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 AMTNQ6UX39 209 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 ZNF562Q6V9R5 426 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 ANAPC13Q9BS18 74 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 NHP2Q9NX24 153 aaKnown RBP8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 GATA3P23771 443 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 NDFIP1Q9BT67 221 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 IGKV2-40A0A087WW87 121 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 LOC389332A0A1B0GUA5 103 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 A0A1B0GUT8 65 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 A0A1B0GW15 77 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 M0R1W7 72 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 IGKV2D-40P01614 121 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 EGR2P11161 476 aaPredicted RBP8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 HLA-DMBP28068 263 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 SMIM20Q8N5G0 67 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 TMUB1Q9BVT8 246 aa8.12□□□□□ -1.11
CLSTN1-203ENST00000435891 MFAP4P55083 255 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 C21orf62Q9NYP8 219 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 MSRB2Q9Y3D2 182 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 TRBV6-1A0A0K0K1D8 114 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 FXYD7P58549 80 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 WFDC3Q8IUB2 231 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 RNF183Q96D59 192 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 MRPL16Q9NX20 251 aaKnown RBP8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 NPIPB5A8MRT5 1133 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 H3BMG7 143 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 FAM106CPP0CH98 169 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 FAM106AQ4KMX7 169 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 C2orf91Q6ZV80 131 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 Q8N6K4 173 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 Q8TAT8 98 aa8.11□□□□□ -1.11
CLSTN1-203ENST00000435891 CTSGP08311 255 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 CHCHD1Q96BP2 118 aaKnown RBP8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 SPAG8Q99932 426 aaPredicted RBP8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 IGHV7-81A0A0B4J1V7 117 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 TMEM213A2RRL7 107 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 CRXO43186 299 aaPredicted RBP8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 CSN1S1P47710 185 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 KLRB1Q12918 225 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 LYPD1Q8N2G4 141 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 TTC9CQ8N5M4 171 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 SMAD5-AS1Q9Y6J3 95 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 IGHG4P01861 327 aa8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 COL25A1Q9BXS0 654 aaPredicted RBP8.1□□□□□ -1.11
CLSTN1-203ENST00000435891 AP5S1Q9NUS5 200 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.4 ms