RNA–Protein interactions for RNA: ENST00000433753.4

SEMA3B-204, Transcript of semaphorin 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-204ENST00000433753 GAS8-AS1O95177 125 aa13.46□□□□□ -0.26
SEMA3B-204ENST00000433753 ORM1P02763 201 aa13.46□□□□□ -0.26
SEMA3B-204ENST00000433753 PET117Q6UWS5 81 aa13.46□□□□□ -0.26
SEMA3B-204ENST00000433753 ZNF493Q6ZR52 646 aa13.46□□□□□ -0.26
SEMA3B-204ENST00000433753 BPESC1Q9GZL8 116 aa13.46□□□□□ -0.26
SEMA3B-204ENST00000433753 NUDT3O95989 172 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 GATD1Q8NB37 220 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 RNASE8Q8TDE3 154 aaKnown RBP13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 HSBP1L1C9JCN9 74 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 SAPCD1Q5SSQ6 148 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 Q6AWC8 147 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 PIP4P2Q8N4L2 257 aa13.45□□□□□ -0.26
SEMA3B-204ENST00000433753 IGHV2-70DA0A0C4DH43 119 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 SLC25A34Q6PIV7 304 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 TMEM219Q86XT9 240 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 WFDC3Q8IUB2 231 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 OR10AG1Q8NH19 301 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 ZNF502Q8TBZ5 544 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 FER1L6-AS1Q8NA97 138 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 SCRT2Q9NQ03 307 aa13.44□□□□□ -0.26
SEMA3B-204ENST00000433753 A0A087X0K7 114 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 A0A1B0GW15 77 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 UCNP55089 124 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 LINC01545Q5VT33 79 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 COL25A1Q9BXS0 654 aaPredicted RBP13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 NPYP01303 97 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 ORMDL3Q8N138 153 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 CCDC140Q96MF4 163 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 ZFAND3Q9H8U3 227 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 CELSR2Q9HCU4 2923 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 K7EP13 123 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 BUB3O43684 328 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 CKS2P33552 79 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 UBE2E1P51965 193 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 OR4C5Q8NGB2 326 aa13.43□□□□□ -0.26
SEMA3B-204ENST00000433753 Q6ZQT7 251 aa13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 IL17RELQ6ZVW7 336 aa13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 CLPSL1A2RUU4 121 aa13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 RBX1P62877 108 aa13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 VAMP3Q15836 100 aa13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 FAM110DQ8TAY7 271 aaPredicted RBP13.42□□□□□ -0.26
SEMA3B-204ENST00000433753 C19orf84I3L1E1 186 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 UQCRFS1P47985 274 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 LMO4P61968 165 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 ABCA2Q9BZC7 2435 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 BVES-AS1Q5T3Y7 98 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 PRSS57Q6UWY2 283 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 U3KQK5 164 aa13.41□□□□□ -0.26
SEMA3B-204ENST00000433753 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.4□□□□□ -0.26
SEMA3B-204ENST00000433753 IGLC6P0CF74 106 aa13.4□□□□□ -0.26
SEMA3B-204ENST00000433753 CSMD2Q7Z408 3487 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 TAX1BP3O14907 124 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 BMI1P35226 326 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 EFNA4P52798 201 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 C12orf54Q6X4T0 127 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 COX8CQ7Z4L0 72 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 MS4A6AQ9H2W1 248 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 CRYBG3Q68DQ2 2970 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 SCGB2A1O75556 95 aa13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 GATA1P15976 413 aaPredicted RBP13.39□□□□□ -0.27
SEMA3B-204ENST00000433753 CENPVL3A0A0U1RRI6 287 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 FABP5P3A8MUU1 101 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 EVI2AP22794 236 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 ANKRD39Q53RE8 183 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 C11orf21Q9P2W6 132 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 GOSR1O95249 250 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 CACNG7P62955 275 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 DEFB125Q8N687 156 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 TMEM190Q8WZ59 177 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 AGPAT4-IT1Q9H0P7 198 aa13.38□□□□□ -0.27
SEMA3B-204ENST00000433753 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.38□□□□□ -0.278e-13■■■□□ 14.6
SEMA3B-204ENST00000433753 BRD3OSQ6XYD6 125 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 RNF185Q96GF1 192 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 C18orf15Q96N68 181 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 PSMG3-AS1Q96PY0 264 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 NPFFO15130 113 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 NHLH1Q02575 133 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 SELENOKQ9Y6D0 94 aa13.37□□□□□ -0.27
SEMA3B-204ENST00000433753 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
SEMA3B-204ENST00000433753 CBY3A6NI87 242 aa13.36□□□□□ -0.27
SEMA3B-204ENST00000433753 PAX8Q06710 450 aa13.36□□□□□ -0.27
SEMA3B-204ENST00000433753 TRAV8-2A0A0B4J237 113 aa13.36□□□□□ -0.27
SEMA3B-204ENST00000433753 CDKN1BP46527 198 aa13.35□□□□□ -0.27
SEMA3B-204ENST00000433753 HIST1H1AQ02539 215 aaPredicted RBP13.35□□□□□ -0.27
SEMA3B-204ENST00000433753 C2orf91Q6ZV80 131 aa13.35□□□□□ -0.27
SEMA3B-204ENST00000433753 J3KRW8 73 aa13.35□□□□□ -0.27
SEMA3B-204ENST00000433753 C5orf56Q8N8D9 126 aa13.35□□□□□ -0.27
SEMA3B-204ENST00000433753 HBDP02042 147 aa13.34□□□□□ -0.27
SEMA3B-204ENST00000433753 COX8AP10176 69 aa13.34□□□□□ -0.27
SEMA3B-204ENST00000433753 RPS20P60866 119 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-204ENST00000433753 DEFB1P60022 68 aa13.34□□□□□ -0.27
SEMA3B-204ENST00000433753 UTP20O75691 2785 aaKnown RBP13.34□□□□□ -0.27
SEMA3B-204ENST00000433753 SPRY2O43597 315 aa13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 TRGV3P03979 118 aa13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 C8orf86Q6ZUL3 223 aa13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 ITLN2Q8WWU7 325 aaPredicted RBP13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 EEF1AKMT3Q96AZ1 226 aa13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 DKK2Q9UBU2 259 aa13.33□□□□□ -0.27
SEMA3B-204ENST00000433753 TRBV12-3P01733 135 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms