RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 RNF141Q8WVD5 230 aa12.42□□□□□ -0.42
NUP50-208ENST00000430547 PYGO2Q9BRQ0 406 aa12.42□□□□□ -0.42
NUP50-208ENST00000430547 C7orf71A4D174 169 aa12.41□□□□□ -0.42
NUP50-208ENST00000430547 TAS2R45P59539 299 aa12.41□□□□□ -0.42
NUP50-208ENST00000430547 UBE2L3P68036 154 aaKnown RBP12.41□□□□□ -0.42
NUP50-208ENST00000430547 FXYD5Q96DB9 178 aa12.41□□□□□ -0.42
NUP50-208ENST00000430547 IGKV2-40A0A087WW87 121 aaPredicted RBP12.4□□□□□ -0.42
NUP50-208ENST00000430547 IGKV2D-40P01614 121 aaPredicted RBP12.4□□□□□ -0.42
NUP50-208ENST00000430547 GPX1P07203 203 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 CSN1S1P47710 185 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 RNF212Q495C1 297 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 C9orf47Q6ZRZ4 202 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 ATG101Q9BSB4 218 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 AGPAT4-IT1Q9H0P7 198 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 MED28Q9H204 178 aa12.4□□□□□ -0.42
NUP50-208ENST00000430547 NACAE9PAV3 2078 aa12.39□□□□□ -0.43
NUP50-208ENST00000430547 M0R2N4 97 aa12.39□□□□□ -0.43
NUP50-208ENST00000430547 KLLNB2CW77 178 aa12.38□□□□□ -0.43
NUP50-208ENST00000430547 NUDT3O95989 172 aa12.38□□□□□ -0.43
NUP50-208ENST00000430547 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
NUP50-208ENST00000430547 RANP62826 216 aaKnown RBP12.38□□□□□ -0.43
NUP50-208ENST00000430547 BTN1A1Q13410 526 aa12.38□□□□□ -0.43
NUP50-208ENST00000430547 ACOT6Q3I5F7 207 aaPredicted RBP12.38□□□□□ -0.43
NUP50-208ENST00000430547 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
NUP50-208ENST00000430547 ZNF680Q8NEM1 530 aa12.38□□□□□ -0.43
NUP50-208ENST00000430547 IGLV2-18A0A075B6J9 118 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 A0A1W2PPV4 95 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 GAGE12BA1L429 117 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 GAGE7O76087 117 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 NMBP08949 121 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 GAGE12FP0CL80 117 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 GAGE12GP0CL81 117 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 GAGE12IP0CL82 117 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 CRISP2P16562 243 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 FAM19A4Q96LR4 140 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 VGLL1Q99990 258 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 Q9H3A6 140 aa12.37□□□□□ -0.43
NUP50-208ENST00000430547 RGS13O14921 159 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 M6PRP20645 277 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 ZNF138P52744 262 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 CD300CQ08708 224 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 OR5I1Q13606 314 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 ZNF266Q14584 549 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 LGALS9BQ3B8N2 356 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 EIF4E3Q8N5X7 224 aaKnown RBP12.36□□□□□ -0.43
NUP50-208ENST00000430547 ZNF503Q96F45 646 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 WFDC1Q9HC57 220 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
NUP50-208ENST00000430547 DNAH10Q8IVF4 4471 aa12.35□□□□□ -0.43
NUP50-208ENST00000430547 FAM3BP58499 235 aaPredicted RBP12.35□□□□□ -0.43
NUP50-208ENST00000430547 FAM74A1Q5RGS3 127 aa12.35□□□□□ -0.43
NUP50-208ENST00000430547 RBAKDNA6NC62 111 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 ZNF324O75467 553 aaPredicted RBP12.34□□□□□ -0.43
NUP50-208ENST00000430547 DAZ2Q13117 558 aaKnown RBP12.34□□□□□ -0.43
NUP50-208ENST00000430547 PQLC2Q6ZP29 291 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 LINC00612Q8N6U2 182 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 Q8TAT8 98 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 CMTM2Q8TAZ6 248 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 RXFP4Q8TDU9 374 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 ARPC5LQ9BPX5 153 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 LINC00467Q9BRT7 94 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 GSN-AS1Q9NRJ2 163 aa12.34□□□□□ -0.43
NUP50-208ENST00000430547 TRGV2A0A075B6R0 118 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 TRBV7-9A0A0J9YWB2 115 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 CCL18P55774 89 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 RAB2AP61019 212 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 ANXA2RQ3ZCQ2 193 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 ZFAND2AQ8N6M9 145 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 HSD17B11Q8NBQ5 300 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 OR10G4Q8NGN3 311 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 OR10G9Q8NGN4 311 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 OR10G7Q8NGN6 311 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 ASB13Q8WXK3 278 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 GNPNAT1Q96EK6 184 aaPredicted RBP12.33□□□□□ -0.44
NUP50-208ENST00000430547 HYLS1Q96M11 299 aa12.33□□□□□ -0.44
NUP50-208ENST00000430547 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 EIF3GO75821 320 aaKnown RBP eCLIP12.32□□□□□ -0.44
NUP50-208ENST00000430547 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 Q6ZTI0 123 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 AQP10Q96PS8 301 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 OTORQ9NRC9 128 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 RPH3ALQ9UNE2 315 aa12.32□□□□□ -0.44
NUP50-208ENST00000430547 IGHV1OR15-1A0A075B7D0 117 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 TRGV1A0A0A0MS02 117 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 DIRC3C9JPN6 131 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 GIPP09681 153 aaPredicted RBP12.31□□□□□ -0.44
NUP50-208ENST00000430547 IBA57Q5T440 356 aaKnown RBP12.31□□□□□ -0.44
NUP50-208ENST00000430547 PRR9Q5T870 116 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 C11orf72Q8NBR9 251 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 INO80EQ8NBZ0 244 aaPredicted RBP12.31□□□□□ -0.44
NUP50-208ENST00000430547 TMPRSS5Q9H3S3 457 aa12.31□□□□□ -0.44
NUP50-208ENST00000430547 A0A0J9YY99 117 aa12.3□□□□□ -0.44
NUP50-208ENST00000430547 PGPA6NDG6 321 aa12.3□□□□□ -0.44
NUP50-208ENST00000430547 HMGB3O15347 200 aaKnown RBP12.3□□□□□ -0.44
NUP50-208ENST00000430547 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
NUP50-208ENST00000430547 TCL1AP56279 114 aa12.3□□□□□ -0.44
NUP50-208ENST00000430547 LENEPQ9Y5L5 61 aa12.3□□□□□ -0.44
NUP50-208ENST00000430547 PRSS29PA6NIE9 313 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms