RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 VGLL1Q99990 258 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 TMPRSS5Q9H3S3 457 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 GSN-AS1Q9NRJ2 163 aa11.84□□□□□ -0.51
CPSF4-203ENST00000430038 APOBP04114 4563 aaKnown RBP11.83□□□□□ -0.52
CPSF4-203ENST00000430038 CCL18P55774 89 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 DAZ2Q13117 558 aaKnown RBP11.83□□□□□ -0.52
CPSF4-203ENST00000430038 ATP6V1FQ16864 119 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 STX12Q86Y82 276 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 CCDC28AQ8IWP9 274 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 OR5C1Q8NGR4 320 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 RXFP4Q8TDU9 374 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 GNPNAT1Q96EK6 184 aaPredicted RBP11.83□□□□□ -0.52
CPSF4-203ENST00000430038 MRPL53Q96EL3 112 aaKnown RBP11.83□□□□□ -0.52
CPSF4-203ENST00000430038 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 TP53TG3Q9ULZ0 132 aa11.83□□□□□ -0.52
CPSF4-203ENST00000430038 IGKV2-40A0A087WW87 121 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-203ENST00000430038 IGKV2D-40P01614 121 aaPredicted RBP11.82□□□□□ -0.52
CPSF4-203ENST00000430038 M6PRP20645 277 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 HBG1P69891 147 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 HBG2P69892 147 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 SOHLH1Q5JUK2 328 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 PYGO2Q9BRQ0 406 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 Q9H8V8 135 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 KLF12Q9Y4X4 402 aa11.82□□□□□ -0.52
CPSF4-203ENST00000430038 C7orf71A4D174 169 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 RLN2P04090 185 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 SLC25A5P05141 298 aaKnown RBP11.81□□□□□ -0.52
CPSF4-203ENST00000430038 RNASE4P34096 147 aaKnown RBP11.81□□□□□ -0.52
CPSF4-203ENST00000430038 ICAM4Q14773 271 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 C9orf47Q6ZRZ4 202 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 ZFAND2AQ8N6M9 145 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 ZNF503Q96F45 646 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 TIMM9Q9Y5J7 89 aa11.81□□□□□ -0.52
CPSF4-203ENST00000430038 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 H2BFSP57053 126 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 CLINT1Q14677 625 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 LRRC37A5PQ49AS3 106 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 MZT2BQ6NZ67 158 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 FAM122CQ6P4D5 195 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 LINC00299Q6ZSB3 139 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 FXYD5Q96DB9 178 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 LINC00477Q96M19 166 aa11.8□□□□□ -0.52
CPSF4-203ENST00000430038 MPDU1O75352 247 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 EIF3GO75821 320 aaKnown RBP eCLIP11.79□□□□□ -0.52
CPSF4-203ENST00000430038 UPK1BO75841 260 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 OR10J4P0C629 311 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 NBEAP1P0C6P0 100 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 CRISP2P16562 243 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 PDE6HQ13956 83 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 PHYHIPLQ96FC7 376 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 LINC00467Q9BRT7 94 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 NMES1Q9C002 83 aa11.79□□□□□ -0.52
CPSF4-203ENST00000430038 WDR61Q9GZS3 305 aaKnown RBP11.79□□□□□ -0.52
CPSF4-203ENST00000430038 A0A096LPF7 62 aa11.78□□□□□ -0.52
CPSF4-203ENST00000430038 OR51M1Q9H341 326 aa11.78□□□□□ -0.52
CPSF4-203ENST00000430038 PRELID1Q9Y255 219 aa11.78□□□□□ -0.52
CPSF4-203ENST00000430038 A6NHS1 94 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 E5RGE8 158 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 SPINK4O60575 86 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 EIF4E3Q8N5X7 224 aaKnown RBP11.77□□□□□ -0.53
CPSF4-203ENST00000430038 Q8TAT8 98 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 S100ZQ8WXG8 99 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 ZNF492Q9P255 531 aa11.77□□□□□ -0.53
CPSF4-203ENST00000430038 TRGV1A0A0A0MS02 117 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 INMT-MINDY4F8WBC2 141 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 H3BNG1 76 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 GPX1P07203 203 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 ENKURQ8TC29 256 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 C18orf15Q96N68 181 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 UPK3BQ9BT76 320 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 SLC25A31Q9H0C2 315 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 FUT9Q9Y231 359 aa11.76□□□□□ -0.53
CPSF4-203ENST00000430038 TCL1AP56279 114 aa11.75□□□□□ -0.53
CPSF4-203ENST00000430038 PPP1R1CQ8WVI7 109 aa11.75□□□□□ -0.53
CPSF4-203ENST00000430038 PAXXQ9BUH6 204 aa11.75□□□□□ -0.53
CPSF4-203ENST00000430038 Q9H3A6 140 aa11.75□□□□□ -0.53
CPSF4-203ENST00000430038 AAMDCQ9H7C9 122 aa11.75□□□□□ -0.53
CPSF4-203ENST00000430038 MRPL16Q9NX20 251 aaKnown RBP11.75□□□□□ -0.53
CPSF4-203ENST00000430038 MRPS16Q9Y3D3 137 aaKnown RBP11.75□□□□□ -0.53
CPSF4-203ENST00000430038 TRGV2A0A075B6R0 118 aa11.74□□□□□ -0.53
CPSF4-203ENST00000430038 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
CPSF4-203ENST00000430038 KRTAP10-2P60368 255 aa11.74□□□□□ -0.53
CPSF4-203ENST00000430038 MARVELD1Q9BSK0 173 aa11.74□□□□□ -0.53
CPSF4-203ENST00000430038 WFDC1Q9HC57 220 aa11.74□□□□□ -0.53
CPSF4-203ENST00000430038 IGHV3-53P01767 116 aa11.73□□□□□ -0.53
CPSF4-203ENST00000430038 NMBP08949 121 aa11.73□□□□□ -0.53
CPSF4-203ENST00000430038 RANP62826 216 aaKnown RBP11.73□□□□□ -0.53
CPSF4-203ENST00000430038 TMEM78Q5T7P6 136 aa11.73□□□□□ -0.53
CPSF4-203ENST00000430038 ZNF680Q8NEM1 530 aa11.73□□□□□ -0.53
CPSF4-203ENST00000430038 IGHV1OR15-1A0A075B7D0 117 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 MPC2O95563 127 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 ZNF138P52744 262 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 FHL2Q14192 279 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 SPATA12Q7Z6I5 190 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 ATP5SQ99766 215 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 MRPL32Q9BYC8 188 aaKnown RBP11.72□□□□□ -0.53
CPSF4-203ENST00000430038 SMIM3Q9BZL3 60 aa11.72□□□□□ -0.53
CPSF4-203ENST00000430038 MDFICQ9P1T7 246 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms