RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 M0R3E3 92 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 HIST1H1EP10412 219 aaKnown RBP10.29□□□□□ -0.76
MSH5-208ENST00000429846 S100A10P60903 97 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 ATP6V1FQ16864 119 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 EIF4E3Q8N5X7 224 aaKnown RBP10.29□□□□□ -0.76
MSH5-208ENST00000429846 TMEM252Q8N6L7 170 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 FAM19A4Q96LR4 140 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 SEC22CQ9BRL7 303 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 AAMDCQ9H7C9 122 aa10.29□□□□□ -0.76
MSH5-208ENST00000429846 NMBP08949 121 aa10.28□□□□□ -0.76
MSH5-208ENST00000429846 FGF7P21781 194 aa10.28□□□□□ -0.76
MSH5-208ENST00000429846 IBA57Q5T440 356 aaKnown RBP10.28□□□□□ -0.76
MSH5-208ENST00000429846 GSN-AS1Q9NRJ2 163 aa10.28□□□□□ -0.76
MSH5-208ENST00000429846 TIMM9Q9Y5J7 89 aa10.28□□□□□ -0.76
MSH5-208ENST00000429846 A0A096LPF7 62 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 TRGV1A0A0A0MS02 117 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 IGSF23A1L1A6 192 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 ZNF324O75467 553 aaPredicted RBP10.27□□□□□ -0.77
MSH5-208ENST00000429846 NDUFB4O95168 129 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 CRISP2P16562 243 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 TCL1AP56279 114 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 ERCC8Q13216 396 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 IL15RAQ13261 267 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 RAB32Q13637 225 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 Q8N1X5 172 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 VSIG2Q96IQ7 327 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 NPCDR1Q9BY65 106 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 FUT9Q9Y231 359 aa10.27□□□□□ -0.77
MSH5-208ENST00000429846 SPINK4O60575 86 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 GPX1P07203 203 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 PYYP10082 97 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 BTN1A1Q13410 526 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 C9orf47Q6ZRZ4 202 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 CCDC32Q9BV29 185 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 AGPAT4-IT1Q9H0P7 198 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 GPN1Q9HCN4 374 aaPredicted RBP10.26□□□□□ -0.77
MSH5-208ENST00000429846 HSPG2P98160 4391 aa10.26□□□□□ -0.77
MSH5-208ENST00000429846 RGS13O14921 159 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 H2AFB2P0C5Z0 115 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 CD300CQ08708 224 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 TMEM78Q5T7P6 136 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 EXOC3-AS1Q8N2X6 119 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 BLNKQ8WV28 456 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 KCNIP2Q9NS61 270 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 ICOSQ9Y6W8 199 aa10.25□□□□□ -0.77
MSH5-208ENST00000429846 TRBV7-9A0A0J9YWB2 115 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 SIVA1O15304 175 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 RNASE4P34096 147 aaKnown RBP10.24□□□□□ -0.77
MSH5-208ENST00000429846 LINC00315P59091 139 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 SLAQ13239 276 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 VGLL1Q99990 258 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 SLC25A2Q9BXI2 301 aa10.24□□□□□ -0.77
MSH5-208ENST00000429846 LRP1BQ9NZR2 4599 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 ICAM4Q14773 271 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 ARPC5LQ9BPX5 153 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 MRPL32Q9BYC8 188 aaKnown RBP10.23□□□□□ -0.77
MSH5-208ENST00000429846 NDUFA13Q9P0J0 144 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 ZNF492Q9P255 531 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 PRO0255Q9UI72 69 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 KLF12Q9Y4X4 402 aa10.23□□□□□ -0.77
MSH5-208ENST00000429846 IGHV1OR15-1A0A075B7D0 117 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 IGKV2-40A0A087WW87 121 aaPredicted RBP10.22□□□□□ -0.77
MSH5-208ENST00000429846 FAM240BA0A1B0GVZ2 78 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 PAX4O43316 350 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 IGKV2D-40P01614 121 aaPredicted RBP10.22□□□□□ -0.77
MSH5-208ENST00000429846 NBEAP1P0C6P0 100 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 GCSAMLQ5JQS6 135 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 FAM122CQ6P4D5 195 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 Q6ZRN7 208 aaPredicted RBP10.22□□□□□ -0.77
MSH5-208ENST00000429846 OR5C1Q8NGR4 320 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 FAM167A-AS1Q96KT0 104 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 SLC25A31Q9H0C2 315 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 OR51M1Q9H341 326 aa10.22□□□□□ -0.77
MSH5-208ENST00000429846 NXPH4O95158 308 aa10.21□□□□□ -0.77
MSH5-208ENST00000429846 ZNF415Q09FC8 603 aa10.21□□□□□ -0.77
MSH5-208ENST00000429846 MZT2BQ6NZ67 158 aa10.21□□□□□ -0.77
MSH5-208ENST00000429846 THAP6Q8TBB0 222 aa10.21□□□□□ -0.77
MSH5-208ENST00000429846 SCRT2Q9NQ03 307 aa10.21□□□□□ -0.77
MSH5-208ENST00000429846 RBAKDNA6NC62 111 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 E5RGE8 158 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 EREGO14944 169 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 ZNF138P52744 262 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 NHLH2Q02577 135 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
MSH5-208ENST00000429846 PRR9Q5T870 116 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 CDPF1Q6NVV7 123 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 LINC00299Q6ZSB3 139 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 MIR17HGQ75NE6 70 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 PAXXQ9BUH6 204 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 MRPL16Q9NX20 251 aaKnown RBP10.2□□□□□ -0.78
MSH5-208ENST00000429846 TP53TG3Q9ULZ0 132 aa10.2□□□□□ -0.78
MSH5-208ENST00000429846 C17orf112F2Z3M2 114 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 K7EP13 123 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 OR10J4P0C629 311 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 CSN1S1P47710 185 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 CRYBA4P53673 196 aa10.19□□□□□ -0.78
MSH5-208ENST00000429846 ERVFC1-1P60608 527 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms