RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 PSMG4Q5JS54 123 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 RBPMS2Q6ZRY4 209 aaKnown RBP6.62□□□□□ -1.35
SMC6-204ENST00000428868 BAGE2Q86Y30 109 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 CBLN2Q8IUK8 224 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 FMC1Q96HJ9 113 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 MLST8Q9BVC4 326 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 AGPAT4-IT1Q9H0P7 198 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 SIGLEC8Q9NYZ4 499 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 PRELID1Q9Y255 219 aa6.62□□□□□ -1.35
SMC6-204ENST00000428868 ZNF256Q9Y2P7 627 aaPredicted RBP6.62□□□□□ -1.35
SMC6-204ENST00000428868 TRBV6-1A0A0K0K1D8 114 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 SNAPINO95295 136 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 MGST1P10620 155 aaKnown RBP6.61□□□□□ -1.35
SMC6-204ENST00000428868 HIST1H1AQ02539 215 aaPredicted RBP6.61□□□□□ -1.35
SMC6-204ENST00000428868 KIR3DS1Q14943 382 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 RNF212Q495C1 297 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 PRR9Q5T870 116 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 PRR27Q6MZM9 219 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 TMEM88Q6PEY1 159 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 C12orf54Q6X4T0 127 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 Q6ZQT7 251 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 ZC2HC1AQ96GY0 325 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 RNASE7Q9H1E1 156 aaKnown RBP6.61□□□□□ -1.35
SMC6-204ENST00000428868 MAP6D1Q9H9H5 199 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
SMC6-204ENST00000428868 KNCNA6PVL3 124 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 NPIPB6E9PJ23 425 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 GCGP01275 180 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 CT45A10P0DMU9 189 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 ID1P41134 155 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 CRIP1P50238 77 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 ZNF80P51504 273 aaPredicted RBP6.6□□□□□ -1.35
SMC6-204ENST00000428868 DEFB131AP59861 70 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 PNRC1Q12796 327 aaPredicted RBP6.6□□□□□ -1.35
SMC6-204ENST00000428868 ODF3L2Q3SX64 289 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 C9orf47Q6ZRZ4 202 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 APRG1Q8IVJ8 170 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 TMEM183AQ8IXX5 376 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 ARL6IP6Q8N6S5 226 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 C3orf56Q8N813 242 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 OR8A1Q8NGG7 326 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 PRR25Q96S07 402 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 WFDC10AQ9H1F0 79 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 LY96Q9Y6Y9 160 aa6.6□□□□□ -1.35
SMC6-204ENST00000428868 PKD1L1Q8TDX9 2849 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 TRAV2A0A0B4J234 112 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 TRAV25A0A0B4J276 109 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 A0A0J9YX75 114 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 SERTM2A0A1B0GWG4 89 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 RBAKDNA6NC62 111 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 RBMY1BA6NDE4 496 aaKnown RBP6.59□□□□□ -1.35
SMC6-204ENST00000428868 RBMY1EA6NEQ0 496 aaKnown RBP6.59□□□□□ -1.35
SMC6-204ENST00000428868 K7EQM0 130 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 S100A9P06702 114 aaKnown RBP6.59□□□□□ -1.35
SMC6-204ENST00000428868 RBMY1DP0C7P1 496 aaKnown RBP6.59□□□□□ -1.35
SMC6-204ENST00000428868 IGLL1P15814 213 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 BTN1A1Q13410 526 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 RHEBQ15382 184 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 SFRP2Q96HF1 295 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 SPAG8Q99932 426 aaPredicted RBP6.59□□□□□ -1.35
SMC6-204ENST00000428868 CLEC5AQ9NY25 188 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 ZNF492Q9P255 531 aa6.59□□□□□ -1.35
SMC6-204ENST00000428868 C19orf71A6NCJ1 209 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 J3KRW8 73 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 CA1P00915 261 aaPredicted RBP6.58□□□□□ -1.36
SMC6-204ENST00000428868 IGKV3-20P01619 116 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 CD7P09564 240 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 ZNF138P52744 262 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 SNRPD3P62318 126 aaKnown RBP6.58□□□□□ -1.36
SMC6-204ENST00000428868 PAFAH1B2P68402 229 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 RPL19P84098 196 aaKnown RBP6.58□□□□□ -1.36
SMC6-204ENST00000428868 TMEM78Q5T7P6 136 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 NUDT10Q8NFP7 164 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 NUDT11Q96G61 164 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 FAM19A4Q96LR4 140 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 SAV1Q9H4B6 383 aaPredicted RBP6.58□□□□□ -1.36
SMC6-204ENST00000428868 V9GYV3 84 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 NOTCH3Q9UM47 2321 aa6.58□□□□□ -1.36
SMC6-204ENST00000428868 MUC4Q99102 2169 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 A0A087WWC5 75 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 OR4C46A6NHA9 309 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 SH2D1AO60880 128 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 FXYD7P58549 80 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 ERVFC1-1P60608 527 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 BEAN1Q3B7T3 259 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 IBA57Q5T440 356 aaKnown RBP6.57□□□□□ -1.36
SMC6-204ENST00000428868 SAMD13Q5VXD3 122 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 FOXI2Q6ZQN5 318 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 ZFAND2AQ8N6M9 145 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 OR10G8Q8NGN5 311 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 OR10J6PQ8NGY7 276 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 YPEL4Q96NS1 127 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 C19orf73Q9NVV2 129 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 C11orf21Q9P2W6 132 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 ZFP30Q9Y2G7 519 aa6.57□□□□□ -1.36
SMC6-204ENST00000428868 B4DEV8 164 aa6.56□□□□□ -1.36
SMC6-204ENST00000428868 H7BYZ3 331 aa6.56□□□□□ -1.36
SMC6-204ENST00000428868 GZMBP10144 247 aa6.56□□□□□ -1.36
SMC6-204ENST00000428868 HLA-DRB4P13762 266 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms