RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 DAZAP1Q96EP5 407 aaKnown RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 CITED1Q99966 193 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 Q9H3A6 140 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 PINLYPA6NC86 204 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 TMEM262E9PQX1 116 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 GLRXP35754 106 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 UQCRFS1P47985 274 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 SIGLEC15Q6ZMC9 328 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 CHAC1Q9BUX1 264 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 DKK2Q9UBU2 259 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 GCSHP23434 173 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 TSTD1Q8NFU3 115 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 DLX4Q92988 240 aaPredicted RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 SRSF8Q9BRL6 282 aaKnown RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 NPIPB5A8MRT5 1133 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 LINC01565O15544 149 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 COX7A2P2O60397 106 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 SAA1P0DJI8 122 aaPredicted RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 COX6B1P14854 86 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 TNFRSF1AP19438 455 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 D6R8Y8 96 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 SRSF2Q01130 221 aaKnown RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 LY6DQ14210 128 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 NHP2Q9NX24 153 aaKnown RBP4.04□□□□□ -1.76
RIF1-203ENST00000428287 B4GALT7Q9UBV7 327 aa4.04□□□□□ -1.76
RIF1-203ENST00000428287 PRRG2O14669 202 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 WT1P19544 449 aaPredicted RBP4.03□□□□□ -1.76
RIF1-203ENST00000428287 C3orf36Q3SXR2 165 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 Q5PR19 223 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 SYT8Q8NBV8 401 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 PPDPFLQ8WWR9 84 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 HARBI1Q96MB7 349 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 SLC25A17O43808 307 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 VEGFBP49765 207 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 RPL32P62910 135 aaKnown RBP4.03□□□□□ -1.76
RIF1-203ENST00000428287 SRSF12Q8WXF0 261 aaKnown RBP4.03□□□□□ -1.76
RIF1-203ENST00000428287 IGHV3-13P01766 116 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 FCER1GP30273 86 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 AMTNQ6UX39 209 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 RPEQ96AT9 228 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 HILPDAQ9Y5L2 63 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
RIF1-203ENST00000428287 IGHV3-43A0A0B4J1X8 118 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 SLC25A5P05141 298 aaKnown RBP4.03□□□□□ -1.76
RIF1-203ENST00000428287 SPINK8P0C7L1 97 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 IGHV3-43DP0DP04 118 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 GATA3P23771 443 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 SHISA2Q6UWI4 295 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 TRBV19A0A075B6N1 114 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 DPM2O94777 84 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 MYOZ3Q8TDC0 251 aa4.03□□□□□ -1.76
RIF1-203ENST00000428287 EPOPA6NHQ4 379 aa4.03□□□□□ -1.77
RIF1-203ENST00000428287 FCN3O75636 299 aa4.03□□□□□ -1.77
RIF1-203ENST00000428287 FAM110AQ9BQ89 295 aa4.03□□□□□ -1.77
RIF1-203ENST00000428287 DEFB108AA8MXU0 73 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 CSN3P07498 182 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 CD40P25942 277 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 GNG5P63218 68 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 HOXA4Q00056 320 aaPredicted RBP4.02□□□□□ -1.77
RIF1-203ENST00000428287 MSMPQ1L6U9 139 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 OR8A1Q8NGG7 326 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 SGK494Q96LW2 274 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 PLNP26678 52 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 S100A7AQ86SG5 101 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 COL7A1Q02388 2944 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 CECR9P0C854 216 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 IGHV1-2P23083 117 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 GOLT1AQ6ZVE7 132 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 NRACQ8N912 160 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 RNF185Q96GF1 192 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 AJUBAQ96IF1 538 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 RAX2Q96IS3 184 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 HINT2Q9BX68 163 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 SRRM2Q9UQ35 2752 aaKnown RBP4.02□□□□□ -1.77
RIF1-203ENST00000428287 IGHV4-4A0A075B6R2 117 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 MYOD1P15172 320 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 NMUP48645 174 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 PRR30Q53SZ7 412 aaPredicted RBP4.02□□□□□ -1.77
RIF1-203ENST00000428287 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 CKS2P33552 79 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 MAPKAPK5-AS1Q8N8E1 139 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 CELA3AP09093 270 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 MDS2Q8NDY4 140 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 PSG8Q9UQ74 426 aa4.02□□□□□ -1.77
RIF1-203ENST00000428287 PRSS29PA6NIE9 313 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 CRYGBP07316 175 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 SPINK2P20155 84 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 EDDM3AQ14507 147 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 SPINK14Q6IE38 97 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 HECTD1Q9ULT8 2610 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 MT-ATP8P03928 68 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 CCL4P13236 92 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 EXOC3-AS1Q8N2X6 119 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 TMEM178AQ8NBL3 297 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 FAM240AA0A1B0GVK7 77 aa4.01□□□□□ -1.77
RIF1-203ENST00000428287 SCNM1Q9BWG6 230 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms