RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 STPG4Q8N801 248 aa10.53□□□□□ -0.72
SPG11-202ENST00000427534 WDR86Q86TI4 376 aa10.53□□□□□ -0.72
SPG11-202ENST00000427534 SNHG12Q9BXW3 62 aa10.53□□□□□ -0.72
SPG11-202ENST00000427534 DYSFO75923 2080 aa10.52□□□□□ -0.72
SPG11-202ENST00000427534 TRAV12-1A0A0B4J245 112 aa10.52□□□□□ -0.72
SPG11-202ENST00000427534 A0A1B0GUS0 222 aa10.52□□□□□ -0.72
SPG11-202ENST00000427534 ETV2O00321 342 aaPredicted RBP10.52□□□□□ -0.72
SPG11-202ENST00000427534 ATXN8Q156A1 80 aa10.52□□□□□ -0.72
SPG11-202ENST00000427534 OOSP1A8MZH6 123 aa10.52□□□□□ -0.73
SPG11-202ENST00000427534 SAMD5Q5TGI4 173 aa10.52□□□□□ -0.73
SPG11-202ENST00000427534 TMEM256Q8N2U0 113 aa10.52□□□□□ -0.73
SPG11-202ENST00000427534 LAMTOR2Q9Y2Q5 125 aa10.52□□□□□ -0.73
SPG11-202ENST00000427534 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
SPG11-202ENST00000427534 HOXB4P17483 251 aaPredicted RBP10.51□□□□□ -0.73
SPG11-202ENST00000427534 WFDC11Q8NEX6 87 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 ZNF479Q96JC4 524 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 CCL24O00175 119 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 ZNF562Q6V9R5 426 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 PLXNA3P51805 1871 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 BCL6BQ8N143 479 aaPredicted RBP10.51□□□□□ -0.73
SPG11-202ENST00000427534 RS1O15537 224 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 ZNF524Q96C55 264 aa10.51□□□□□ -0.73
SPG11-202ENST00000427534 TRBV24-1A0A075B6N3 115 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 COLCA2A8K830 154 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 DEFB113Q30KQ7 82 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 C17orf77Q96MU5 243 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 C17orf58Q2M2W7 97 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 C5orf30Q96GV9 206 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 TMEM75Q8N9X5 138 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 NCOR1O75376 2440 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 IGLV3-9A0A075B6K5 115 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 DTX1Q86Y01 620 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 PROK2Q9HC23 129 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 PPBPP02775 128 aa10.5□□□□□ -0.73
SPG11-202ENST00000427534 CFPP27918 469 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 FAM90A2PQ658T7 463 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 LINC01551Q86U37 167 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 CYYR1Q96J86 154 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 GNRH2O43555 120 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 PROP1O75360 226 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 IGHV4-61A0A0C4DH41 118 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 TRAV9-2A0A087WT02 112 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 LYL1P12980 280 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 GAGE2EQ4V326 116 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 Q86TA4 180 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 GAGE2DQ9UEU5 116 aa10.49□□□□□ -0.73
SPG11-202ENST00000427534 LOXP28300 417 aaPredicted RBP10.49□□□□□ -0.73
SPG11-202ENST00000427534 KLF5Q13887 457 aaPredicted RBP10.49□□□□□ -0.73
SPG11-202ENST00000427534 UBE2CO00762 179 aa10.48□□□□□ -0.73
SPG11-202ENST00000427534 TNFRSF6BO95407 300 aa10.48□□□□□ -0.73
SPG11-202ENST00000427534 F8W735 103 aaPredicted RBP10.48□□□□□ -0.73
SPG11-202ENST00000427534 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.48□□□□□ -0.73
SPG11-202ENST00000427534 IGKV2-29A2NJV5 120 aaPredicted RBP10.48□□□□□ -0.73
SPG11-202ENST00000427534 A8MWV9 139 aa10.48□□□□□ -0.73
SPG11-202ENST00000427534 SHANK2-AS3Q9BTD1 123 aa10.48□□□□□ -0.73
SPG11-202ENST00000427534 IGKV1-6A0A0C4DH72 117 aa10.48□□□□□ -0.73
SPG11-202ENST00000427534 PCP4P48539 62 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 TAL2Q16559 108 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 PLA2G2CQ5R387 149 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 PIFOQ8TCI5 191 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 TMEM190Q8WZ59 177 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 CHCHD1Q96BP2 118 aaKnown RBP10.47□□□□□ -0.73
SPG11-202ENST00000427534 TIMM17AQ99595 171 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 PLXNA4Q9HCM2 1894 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 IGHV4-28A0A0C4DH34 117 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 HLA-DRB4P13762 266 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 TRPT1Q86TN4 253 aaKnown RBP10.47□□□□□ -0.73
SPG11-202ENST00000427534 HIST1H2BLQ99880 126 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 SCRT2Q9NQ03 307 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 HLA-DRB4X5D2U9 266 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 IGHV1OR15-1A0A075B7D0 117 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 ANAPC13Q9BS18 74 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 H3BMM0 161 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 ZNF134P52741 427 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 UBE2WQ96B02 151 aa10.47□□□□□ -0.73
SPG11-202ENST00000427534 ADAMTS9Q9P2N4 1935 aa10.46□□□□□ -0.73
SPG11-202ENST00000427534 RITA1Q96K30 269 aa10.46□□□□□ -0.73
SPG11-202ENST00000427534 WIPF3A6NGB9 483 aa10.46□□□□□ -0.73
SPG11-202ENST00000427534 LINC00587B1AMM8 73 aa10.46□□□□□ -0.73
SPG11-202ENST00000427534 TSSC4Q9Y5U2 329 aaPredicted RBP10.46□□□□□ -0.73
SPG11-202ENST00000427534 BLCAPP62952 87 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 MORN5Q5VZ52 161 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 ZNF407Q9C0G0 2248 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 MYMXA0A1B0GTQ4 84 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 GATA3P23771 443 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 HIST3H2BBQ8N257 126 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 ACACAQ13085 2346 aa10.46□□□□□ -0.74
SPG11-202ENST00000427534 TMEM243Q9BU79 118 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 PLEKHB2Q96CS7 222 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 CHAC1Q9BUX1 264 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 SRCAPQ6ZRS2 3230 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 CHD3Q12873 2000 aaKnown RBP10.45□□□□□ -0.74
SPG11-202ENST00000427534 CDKN1BP46527 198 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 ZC2HC1BQ5TFG8 222 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 TSC2P49815 1807 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 KLF12Q9Y4X4 402 aa10.45□□□□□ -0.74
SPG11-202ENST00000427534 LGALS1P09382 135 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms