RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 B4DEV8 164 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 RPL29P47914 159 aaKnown RBP9.28□□□□□ -0.92
SMIM12-203ENST00000426886 CCL20P78556 96 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 PRR20EP86478 221 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 PRR20CP86479 221 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 PRR20DP86480 221 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 PRR20BP86481 221 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 PRR20AP86496 221 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 C10orf113Q5VZT2 155 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 ZNF709Q8N972 641 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 WDR61Q9GZS3 305 aaKnown RBP9.28□□□□□ -0.92
SMIM12-203ENST00000426886 DNAJC4Q9NNZ3 241 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 VAX2Q9UIW0 290 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 GALR1P47211 349 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 FAM213BQ8TBF2 198 aa9.28□□□□□ -0.92
SMIM12-203ENST00000426886 H3BTX0 84 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 IFNA5P01569 189 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 CEBPGP53567 150 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 SNRPD3P62318 126 aaKnown RBP9.27□□□□□ -0.93
SMIM12-203ENST00000426886 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 SCGB1C1Q8TD33 95 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 FAM110AQ9BQ89 295 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 MPDU1O75352 247 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 LINC00322Q6ZN03 302 aaPredicted RBP9.27□□□□□ -0.93
SMIM12-203ENST00000426886 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 C16orf92Q96LL3 132 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 ZMAT4Q9H898 229 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 AGRNO00468 2067 aa9.27□□□□□ -0.93
SMIM12-203ENST00000426886 TRAV2A0A0B4J234 112 aa9.26□□□□□ -0.93
SMIM12-203ENST00000426886 NHLRC4P0CG21 123 aaPredicted RBP9.26□□□□□ -0.93
SMIM12-203ENST00000426886 S100A7P31151 101 aa9.26□□□□□ -0.93
SMIM12-203ENST00000426886 C17orf77Q96MU5 243 aa9.26□□□□□ -0.93
SMIM12-203ENST00000426886 CMC4P56277 68 aaPredicted RBP9.26□□□□□ -0.93
SMIM12-203ENST00000426886 MAJINQ3KP22 176 aa9.26□□□□□ -0.93
SMIM12-203ENST00000426886 RPL7P18124 248 aaKnown RBP9.25□□□□□ -0.93
SMIM12-203ENST00000426886 ICAM4Q14773 271 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 S100A7AQ86SG5 101 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 STHQ8IWL8 128 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 OR1L4Q8NGR5 311 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 RCHY1Q96PM5 261 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 XKRY2A2RUG3 117 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 IGKV3-20P01619 116 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 FAM78BQ5VT40 261 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 CFAP161Q6P656 301 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 SEPSECSQ9HD40 501 aaKnown RBP9.25□□□□□ -0.93
SMIM12-203ENST00000426886 U3KQK5 164 aa9.25□□□□□ -0.93
SMIM12-203ENST00000426886 C17orf112F2Z3M2 114 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 ID1P41134 155 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 ZNF506Q5JVG8 444 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 SPATA31B1PQ5VZV4 182 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
SMIM12-203ENST00000426886 TMEM18Q96B42 140 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 F6UB75 175 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 DEFB135Q30KP9 77 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 FFAR4Q5NUL3 377 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 GDF5OSQ5U4N7 250 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 C20orf173Q96LM9 149 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 GPR82Q96P67 336 aa9.24□□□□□ -0.93
SMIM12-203ENST00000426886 A0A1W2PPQ1 181 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 SOCS3O14543 225 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 HLA-DMBP28068 263 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 CDKN1BP46527 198 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 ZNF705AQ6ZN79 300 aaPredicted RBP9.23□□□□□ -0.93
SMIM12-203ENST00000426886 BPIFA4PQ86YQ2 179 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 ZFP30Q9Y2G7 519 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 APOC4P55056 127 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 PNRC1Q12796 327 aaPredicted RBP9.23□□□□□ -0.93
SMIM12-203ENST00000426886 PMS2P11Q13670 270 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 OR10G4Q8NGN3 311 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 GATAD1Q8WUU5 269 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
SMIM12-203ENST00000426886 OR5I1Q13606 314 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 MIR17HGQ75NE6 70 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 OR4B1Q8NGF8 309 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 CSTL1Q9H114 145 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 ISLRO14498 428 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 MRPS12O15235 138 aaKnown RBP9.22□□□□□ -0.93
SMIM12-203ENST00000426886 ZNF705DP0CH99 300 aaPredicted RBP9.22□□□□□ -0.93
SMIM12-203ENST00000426886 ZNF705BP0CI00 300 aaPredicted RBP9.22□□□□□ -0.93
SMIM12-203ENST00000426886 PYYP10082 97 aa9.22□□□□□ -0.93
SMIM12-203ENST00000426886 TRAV8-2A0A0B4J237 113 aa9.21□□□□□ -0.93
SMIM12-203ENST00000426886 SCGB1D1O95968 90 aa9.21□□□□□ -0.93
SMIM12-203ENST00000426886 CA1P00915 261 aaPredicted RBP9.21□□□□□ -0.93
SMIM12-203ENST00000426886 PSMB3P49720 205 aa9.21□□□□□ -0.93
SMIM12-203ENST00000426886 ZNF266Q14584 549 aa9.21□□□□□ -0.93
SMIM12-203ENST00000426886 FXYD7P58549 80 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 BLNKQ8WV28 456 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 PYGO2Q9BRQ0 406 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 CTDSP1Q9GZU7 261 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 KCNIP2Q9NS61 270 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 CLEC5AQ9NY25 188 aa9.21□□□□□ -0.94
SMIM12-203ENST00000426886 SLC17A3O00476 420 aa9.2□□□□□ -0.94
SMIM12-203ENST00000426886 MIEN1Q9BRT3 115 aa9.2□□□□□ -0.94
SMIM12-203ENST00000426886 RPRMQ9NS64 109 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms