RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 SCGB1C2P0DMR2 95 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 DYNAPQ8N1N2 210 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 OR10AG1Q8NH19 301 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 IGHV7-4-1A0A0J9YVY3 117 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 TNFRSF13BO14836 293 aaPredicted RBP7.64□□□□□ -1.19
CMSS1-201ENST00000421999 ORMDL3Q8N138 153 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 LYPD1Q8N2G4 141 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 SSBP4Q9BWG4 385 aaPredicted RBP7.64□□□□□ -1.19
CMSS1-201ENST00000421999 TOMM7Q9P0U1 55 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 BOD1L1Q8NFC6 3051 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 CXorf65A6NEN9 183 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 LY6G6DO95868 133 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 PRSS2P07478 247 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 NMUP48645 174 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 SRSF2Q01130 221 aaKnown RBP7.64□□□□□ -1.19
CMSS1-201ENST00000421999 PDE6HQ13956 83 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 OR10J3Q5JRS4 329 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 DEFB104AQ8WTQ1 72 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 AJUBAQ96IF1 538 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 CITED2Q99967 270 aaPredicted RBP7.64□□□□□ -1.19
CMSS1-201ENST00000421999 A8MXK9 166 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 CD5LO43866 347 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 C1orf194Q5T5A4 169 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 DMRT1Q9Y5R6 373 aa7.64□□□□□ -1.19
CMSS1-201ENST00000421999 PRADC1Q9BSG0 188 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 SMPXQ9UHP9 88 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 SOX21Q9Y651 276 aaPredicted RBP7.63□□□□□ -1.19
CMSS1-201ENST00000421999 TRAV12-2A0A075B6T6 113 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 IGLV2-23P01705 113 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 CFHR3Q02985 330 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 NPBQ8NG41 125 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 FOXC2Q99958 501 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 OSTCQ9NRP0 149 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 ZNF295-AS1Q8N0V1 137 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 ZNF491Q8N8L2 437 aa7.63□□□□□ -1.19
CMSS1-201ENST00000421999 F5H768 121 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 APOC4P55056 127 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 LBHQ53QV2 105 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-201ENST00000421999 NUDT10Q8NFP7 164 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 NUDT11Q96G61 164 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 ST20Q9HBF5 79 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 TMEM170BQ5T4T1 132 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 KLK9Q9UKQ9 250 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
CMSS1-201ENST00000421999 RPL36AP83881 106 aaKnown RBP7.62□□□□□ -1.19
CMSS1-201ENST00000421999 ZNF876PQ49A33 203 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 MEIG1Q5JSS6 88 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 PRR31Q5SQ13 230 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 RPL36ALQ969Q0 106 aaKnown RBP7.62□□□□□ -1.19
CMSS1-201ENST00000421999 ZMAT4Q9H898 229 aa7.62□□□□□ -1.19
CMSS1-201ENST00000421999 ODF3BA8MYP8 253 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 DIRC3C9JPN6 131 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 F2Z2F3 143 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 IGHG2P01859 326 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 DAD1P61803 113 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 C9orf66Q5T8R8 295 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 PAM16Q9Y3D7 125 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 TRBV19A0A075B6N1 114 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 IZUMO1RA6ND01 250 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 CRPP02741 224 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 GP9P14770 177 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 SSBP2P81877 361 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-201ENST00000421999 COL27A1Q8IZC6 1860 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-201ENST00000421999 TRBV9A0A0B4J1U6 114 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 EVI2AP22794 236 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 SCGB3A1Q96QR1 104 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 PRO1933Q9H354 126 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 DMDP11532 3685 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 MAST4O15021 2626 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 IGHV4OR15-8A0A075B7B6 117 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 A0A087WW49 117 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 TRAV1-1A0A0B4J248 108 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 A0A1B0GW15 77 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 C7orf71A4D174 169 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 F6UB75 175 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 SH2D1AO60880 128 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 GFI1BQ5VTD9 330 aa7.61□□□□□ -1.19
CMSS1-201ENST00000421999 PARD6GQ9BYG4 376 aaPredicted RBP7.61□□□□□ -1.19
CMSS1-201ENST00000421999 IGKV3D-20A0A0C4DH25 116 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 IFITM10A6NMD0 228 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 CACNG7P62955 275 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 RNF151Q2KHN1 245 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 C14orf178Q8N769 122 aaPredicted RBP7.6□□□□□ -1.19
CMSS1-201ENST00000421999 SMR3AQ99954 134 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 HELZ2Q9BYK8 2649 aaKnown RBP7.6□□□□□ -1.19
CMSS1-201ENST00000421999 A6NDX4 124 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 TSKUQ8WUA8 353 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 A0A087WWL8 130 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 K7EIM0 57 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 ARMS2P0C7Q2 107 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 ZNF25P17030 456 aaPredicted RBP7.6□□□□□ -1.19
CMSS1-201ENST00000421999 CDKN1BP46527 198 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 LYZL1Q6UWQ5 148 aa7.6□□□□□ -1.19
CMSS1-201ENST00000421999 GAGE12BA1L429 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 GAGE7O76087 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 AMBPP02760 352 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 GAGE12FP0CL80 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 GAGE12GP0CL81 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 GAGE12IP0CL82 117 aa7.59□□□□□ -1.19
CMSS1-201ENST00000421999 PKIAP61925 76 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms