RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SMIM3Q9BZL3 60 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 COPZ2Q9P299 210 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 HS3ST2Q9Y278 367 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 MYH9P35579 1960 aaKnown RBP1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 USP54Q70EL1 1684 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 PTPRSQ13332 1948 aa1.44□□□□□ -2.18
HMGB1P49-201ENST00000418882 PEAK1Q9H792 1746 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 MARF1Q9Y4F3 1742 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 AFDNP55196 1824 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 XIRP1Q702N8 1843 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 EDC4Q6P2E9 1401 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 ANKARQ7Z5J8 1434 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 PIK3C2AO00443 1686 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 RIMS1Q86UR5 1692 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TOPAZ1Q8N9V7 1692 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 BAZ2BQ9UIF8 2168 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 MEIKINA0A087WXM9 373 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 IGKV2D-26A0A0A0MRZ7 120 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRAV13-1A0A0B4J241 112 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRAV1-1A0A0B4J248 108 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 C7orf71A4D174 169 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 FNDC10F2Z333 226 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 H3BMG7 143 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 RER1O15258 196 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 HIST1H2BKO60814 126 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TIMM17BO60830 172 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 DPM2O94777 84 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 PRB1P04280 392 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 HIST1H2BJP06899 126 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 DBIP07108 87 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 RPL22P35268 128 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 RPL35P42766 123 aaKnown RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 ROMO1P60602 79 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 WHAMMP3Q1A5X7 153 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 C4orf22Q6V702 233 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 C7orf65Q6ZTY9 151 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 CROCCP2Q86T23 111 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 LRRC28Q86X40 367 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 WFDC11Q8NEX6 87 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TSTD1Q8NFU3 115 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 NAT14Q8WUY8 206 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 DIRC1Q969H9 104 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 TSC22D3Q99576 134 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 LXNQ9BS40 222 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 LHFPL6Q9Y693 200 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 LAMB4A4D0S4 1761 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 RGPD8O14715 1765 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 MED23Q9ULK4 1368 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 ALKQ9UM73 1620 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 MRC1P22897 1456 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 MLH3Q9UHC1 1453 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 WNK3Q9BYP7 1800 aa1.43□□□□□ -2.18
HMGB1P49-201ENST00000418882 GREB1Q4ZG55 1949 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 LMO7Q8WWI1 1683 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 HEATR5AQ86XA9 2040 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 RGPD2P0DJD1 1756 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 AGLP35573 1532 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 PHRF1Q9P1Y6 1649 aaKnown RBP1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 A0A096LPI6 279 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 TRBV27A0A0K0K1C4 114 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 CCDC160A6NGH7 325 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 HMSDA8MTL9 139 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF727A8MUV8 499 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 PMP2P02689 132 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ASAH2BP0C7U1 165 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 LINC00694P0DN24 101 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 HINT1P49773 126 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 DEFB103AP81534 67 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 DIAPH2-AS1Q14236 149 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF846Q147U1 533 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ESRGQ1W209 222 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 DEFB113Q30KQ7 82 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 RNASE10Q5GAN6 216 aaKnown RBP1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF826PQ6ZT77 177 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 DEFB128Q7Z7B8 93 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 Q8N814 137 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 LINC00301Q8NCQ3 95 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR51A4Q8NGJ6 313 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR4K15Q8NH41 348 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ZNF714Q96N38 554 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 RETNLBQ9BQ08 111 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 NAA38Q9BRA0 125 aaKnown RBP1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 VPS25Q9BRG1 176 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 TIMM21Q9BVV7 248 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 TCEAL2Q9H3H9 227 aaPredicted RBP1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 OR5AC2Q9NZP5 309 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 TNFSF18Q9UNG2 199 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 RTL9Q8NET4 1388 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 KIF13AQ9H1H9 1805 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 BCL9LQ86UU0 1499 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 NWD1Q149M9 1564 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 ADAMTS7Q9UKP4 1686 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 LAMB1P07942 1786 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 BCORQ6W2J9 1755 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 SCN11AQ9UI33 1791 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 DLEC1Q9Y238 1755 aa1.42□□□□□ -2.18
HMGB1P49-201ENST00000418882 RIC1Q4ADV7 1423 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 ARHGAP32A7KAX9 2087 aa1.41□□□□□ -2.18
HMGB1P49-201ENST00000418882 SLIT1O75093 1534 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms