RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 SLC25A5P05141 298 aaKnown RBP17.75■□□□□ 0.43
VEGFA-208ENST00000417285 NBEAP1P0C6P0 100 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 ERCC8Q13216 396 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 ICAM4Q14773 271 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 PYGO2Q9BRQ0 406 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 PAXXQ9BUH6 204 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 FUT9Q9Y231 359 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 KIAA1109Q2LD37 5005 aa17.75■□□□□ 0.43
VEGFA-208ENST00000417285 SNURFLB1AK76 121 aa17.74■□□□□ 0.43
VEGFA-208ENST00000417285 RPL12P30050 165 aaKnown RBP17.74■□□□□ 0.43
VEGFA-208ENST00000417285 LINC00612Q8N6U2 182 aa17.74■□□□□ 0.43
VEGFA-208ENST00000417285 IFNA5P01569 189 aa17.73■□□□□ 0.43
VEGFA-208ENST00000417285 SCGB1C1Q8TD33 95 aa17.73■□□□□ 0.43
VEGFA-208ENST00000417285 AGPAT4-IT1Q9H0P7 198 aa17.73■□□□□ 0.43
VEGFA-208ENST00000417285 C7orf71A4D174 169 aa17.72■□□□□ 0.43
VEGFA-208ENST00000417285 FAM122CQ6P4D5 195 aa17.72■□□□□ 0.43
VEGFA-208ENST00000417285 C9orf47Q6ZRZ4 202 aa17.72■□□□□ 0.43
VEGFA-208ENST00000417285 RNF141Q8WVD5 230 aa17.72■□□□□ 0.43
VEGFA-208ENST00000417285 MBD2Q9UBB5 411 aa17.72■□□□□ 0.43
VEGFA-208ENST00000417285 PKHD1P08F94 4074 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 KLLNB2CW77 178 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 OR7C2O60412 319 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 OR10J4P0C629 311 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 MED14OSP0DP75 135 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 FFAR4Q5NUL3 377 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 TMEM78Q5T7P6 136 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 ZNRF2Q8NHG8 242 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 FXYD5Q96DB9 178 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 FAM19A4Q96LR4 140 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 SMIM3Q9BZL3 60 aa17.71■□□□□ 0.43
VEGFA-208ENST00000417285 DAZ2Q13117 558 aaKnown RBP17.7■□□□□ 0.42
VEGFA-208ENST00000417285 OR5I1Q13606 314 aa17.7■□□□□ 0.42
VEGFA-208ENST00000417285 ZNF503Q96F45 646 aa17.7■□□□□ 0.42
VEGFA-208ENST00000417285 NACAE9PAV3 2078 aa17.69■□□□□ 0.42
VEGFA-208ENST00000417285 IGKV2-40A0A087WW87 121 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-208ENST00000417285 NBDYA0A0U1RRE5 68 aa17.69■□□□□ 0.42
VEGFA-208ENST00000417285 IGKV2D-40P01614 121 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-208ENST00000417285 M6PRP20645 277 aa17.69■□□□□ 0.42
VEGFA-208ENST00000417285 ZNF680Q8NEM1 530 aa17.69■□□□□ 0.42
VEGFA-208ENST00000417285 GNPNAT1Q96EK6 184 aaPredicted RBP17.69■□□□□ 0.42
VEGFA-208ENST00000417285 PKD1P98161 4303 aa17.69■□□□□ 0.42
VEGFA-208ENST00000417285 GAGE12BA1L429 117 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 GAGE7O76087 117 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 GPX1P07203 203 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 NMBP08949 121 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 GAGE12FP0CL80 117 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 GAGE12GP0CL81 117 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 GAGE12IP0CL82 117 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 CRISP2P16562 243 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 TAS2R45P59539 299 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 BTN1A1Q13410 526 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 RXFP4Q8TDU9 374 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 PHYHIPLQ96FC7 376 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 LINC00467Q9BRT7 94 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 LINC00588Q9Y4M8 146 aa17.68■□□□□ 0.42
VEGFA-208ENST00000417285 TRAV26-1A0A087WT03 109 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 H3BNG1 76 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 RNASE4P34096 147 aaKnown RBP17.67■□□□□ 0.42
VEGFA-208ENST00000417285 CSN1S1P47710 185 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 CD300CQ08708 224 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 KHDC3LQ587J8 217 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 LYPD1Q8N2G4 141 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 VGLL1Q99990 258 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 KRTAP17-1Q9BYP8 105 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 ALG5Q9Y673 324 aa17.67■□□□□ 0.42
VEGFA-208ENST00000417285 ZNF324O75467 553 aaPredicted RBP17.66■□□□□ 0.42
VEGFA-208ENST00000417285 UBE2L3P68036 154 aaKnown RBP17.66■□□□□ 0.42
VEGFA-208ENST00000417285 EIF4E3Q8N5X7 224 aaKnown RBP17.66■□□□□ 0.42
VEGFA-208ENST00000417285 ZNF492Q9P255 531 aa17.66■□□□□ 0.42
VEGFA-208ENST00000417285 RANP62826 216 aaKnown RBP17.65■□□□□ 0.42
VEGFA-208ENST00000417285 SSX7Q7RTT5 188 aa17.65■□□□□ 0.42
VEGFA-208ENST00000417285 PTTG1O95997 202 aa17.64■□□□□ 0.41
VEGFA-208ENST00000417285 ZNF138P52744 262 aa17.64■□□□□ 0.41
VEGFA-208ENST00000417285 ANXA2RQ3ZCQ2 193 aa17.64■□□□□ 0.41
VEGFA-208ENST00000417285 Q9H3A6 140 aa17.64■□□□□ 0.41
VEGFA-208ENST00000417285 GSN-AS1Q9NRJ2 163 aa17.64■□□□□ 0.41
VEGFA-208ENST00000417285 TRBV7-9A0A0J9YWB2 115 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 HOXA5P20719 270 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 ACOT6Q3I5F7 207 aaPredicted RBP17.63■□□□□ 0.41
VEGFA-208ENST00000417285 C6orf223Q8N319 242 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 ZFAND2AQ8N6M9 145 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 C18orf15Q96N68 181 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 Q9H8V8 135 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 WFDC1Q9HC57 220 aa17.63■□□□□ 0.41
VEGFA-208ENST00000417285 RBAKDNA6NC62 111 aa17.62■□□□□ 0.41
VEGFA-208ENST00000417285 Q6ZTI0 123 aa17.62■□□□□ 0.41
VEGFA-208ENST00000417285 C11orf72Q8NBR9 251 aa17.62■□□□□ 0.41
VEGFA-208ENST00000417285 A0A0J9YY99 117 aa17.61■□□□□ 0.41
VEGFA-208ENST00000417285 RGS13O14921 159 aa17.61■□□□□ 0.41
VEGFA-208ENST00000417285 PRR9Q5T870 116 aa17.61■□□□□ 0.41
VEGFA-208ENST00000417285 TRGV2A0A075B6R0 118 aa17.6■□□□□ 0.41
VEGFA-208ENST00000417285 A0A1W2PPV4 95 aa17.6■□□□□ 0.41
VEGFA-208ENST00000417285 Q8TAT8 98 aa17.6■□□□□ 0.41
VEGFA-208ENST00000417285 MED28Q9H204 178 aa17.6■□□□□ 0.41
VEGFA-208ENST00000417285 DNAH11Q96DT5 4516 aa17.6■□□□□ 0.41
VEGFA-208ENST00000417285 IBA57Q5T440 356 aaKnown RBP17.59■□□□□ 0.41
VEGFA-208ENST00000417285 ARPC5LQ9BPX5 153 aa17.59■□□□□ 0.41
VEGFA-208ENST00000417285 TMPRSS5Q9H3S3 457 aa17.59■□□□□ 0.41
VEGFA-208ENST00000417285 IGHV1OR15-1A0A075B7D0 117 aa17.58■□□□□ 0.4
VEGFA-208ENST00000417285 TRGV1A0A0A0MS02 117 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms