RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 TRAV12-2A0A075B6T6 113 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 SPRY2O43597 315 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 ATP5G3P48201 142 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 KIR3DS1Q14943 382 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 Q8TAT8 98 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 GNG13Q9P2W3 67 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 TEX46H3BTG2 121 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 TCRAP04437 139 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 TMEM78Q5T7P6 136 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 ZNF680Q8NEM1 530 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 LINC00477Q96M19 166 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 C1QTNF4Q9BXJ3 329 aa22.28■■□□□ 1.16
CSNK1E-206ENST00000413574 TRAV8-1A0A0A6YYK1 113 aa22.27■■□□□ 1.16
CSNK1E-206ENST00000413574 CRXO43186 299 aaPredicted RBP22.27■■□□□ 1.16
CSNK1E-206ENST00000413574 IFNA7P01567 189 aa22.27■■□□□ 1.16
CSNK1E-206ENST00000413574 ARL6IP6Q8N6S5 226 aa22.27■■□□□ 1.16
CSNK1E-206ENST00000413574 SGK494Q96LW2 274 aa22.27■■□□□ 1.16
CSNK1E-206ENST00000413574 RBAKDNA6NC62 111 aa22.26■■□□□ 1.15
CSNK1E-206ENST00000413574 J3KRW8 73 aa22.26■■□□□ 1.15
CSNK1E-206ENST00000413574 BLOC1S1P78537 153 aa22.26■■□□□ 1.15
CSNK1E-206ENST00000413574 CCDC28AQ8IWP9 274 aa22.25■■□□□ 1.15
CSNK1E-206ENST00000413574 NKX6-2Q9C056 277 aaPredicted RBP22.25■■□□□ 1.15
CSNK1E-206ENST00000413574 ZNF492Q9P255 531 aa22.25■■□□□ 1.15
CSNK1E-206ENST00000413574 PCNPQ8WW12 178 aaKnown RBP22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 TP53TG1Q9Y2A0 90 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 ARL2-SNX15V9GYD0 113 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 CDKN1BP46527 198 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 PPT1P50897 306 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 ZNF138P52744 262 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 FAM19A4Q96LR4 140 aa22.24■■□□□ 1.15
CSNK1E-206ENST00000413574 LINC00479Q96M42 142 aa22.23■■□□□ 1.15
CSNK1E-206ENST00000413574 ODF3Q96PU9 254 aa22.23■■□□□ 1.15
CSNK1E-206ENST00000413574 ATG101Q9BSB4 218 aa22.23■■□□□ 1.15
CSNK1E-206ENST00000413574 IGF2BP2-AS1Q96M15 143 aa22.22■■□□□ 1.15
CSNK1E-206ENST00000413574 MANBALQ9NQG1 85 aa22.22■■□□□ 1.15
CSNK1E-206ENST00000413574 C1orf158Q8N1D5 194 aa22.21■■□□□ 1.15
CSNK1E-206ENST00000413574 CYB561D1Q8N8Q1 229 aa22.21■■□□□ 1.15
CSNK1E-206ENST00000413574 OR11H2Q8NH07 326 aa22.21■■□□□ 1.15
CSNK1E-206ENST00000413574 U3KQK5 164 aa22.21■■□□□ 1.15
CSNK1E-206ENST00000413574 IGHV3OR16-12A0A075B7B8 117 aa22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 PEX7O00628 323 aa22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 AMBPP02760 352 aa22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 RBMY1A1P0DJD3 496 aaKnown RBP22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 RBMY1CP0DJD4 496 aa22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 LEPP41159 167 aa22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 RBMY1FQ15415 496 aaKnown RBP22.2■■□□□ 1.15
CSNK1E-206ENST00000413574 TRAV34A0A0B4J273 112 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 C11orf94C9JXX5 98 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 TSPOP30536 169 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 GFI1BQ5VTD9 330 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 LYPD6BQ8NI32 183 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 RARRES2Q99969 163 aa22.2■■□□□ 1.14
CSNK1E-206ENST00000413574 INSP01308 110 aa22.19■■□□□ 1.14
CSNK1E-206ENST00000413574 SERTM2A0A1B0GWG4 89 aa22.18■■□□□ 1.14
CSNK1E-206ENST00000413574 K7EQM0 130 aa22.18■■□□□ 1.14
CSNK1E-206ENST00000413574 IGLV2-11P01706 119 aa22.18■■□□□ 1.14
CSNK1E-206ENST00000413574 PRR9Q5T870 116 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 ZFAND2AQ8N6M9 145 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 HIST1H2BAQ96A08 127 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 TVP23CQ96ET8 276 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 X6R8D5 127 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 STAB2Q8WWQ8 2551 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 CRISP2P16562 243 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 ZNF705AQ6ZN79 300 aaPredicted RBP22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 PSG8Q9UQ74 426 aa22.17■■□□□ 1.14
CSNK1E-206ENST00000413574 SCO2A0A1W2PP80 73 aa22.16■■□□□ 1.14
CSNK1E-206ENST00000413574 KLLNB2CW77 178 aa22.16■■□□□ 1.14
CSNK1E-206ENST00000413574 BTN1A1Q13410 526 aa22.16■■□□□ 1.14
CSNK1E-206ENST00000413574 PMS2P11Q13670 270 aa22.16■■□□□ 1.14
CSNK1E-206ENST00000413574 TMEM75Q8N9X5 138 aa22.16■■□□□ 1.14
CSNK1E-206ENST00000413574 TRAV12-3A0A0B4J271 114 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 IFNA1P01562 189 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 GPX1P07203 203 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 BCL2P10415 239 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 RNASE4P34096 147 aaKnown RBP22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 PRNTQ86SH4 94 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 GOLT1BQ9Y3E0 138 aa22.15■■□□□ 1.14
CSNK1E-206ENST00000413574 PRM2P04554 102 aa22.14■■□□□ 1.14
CSNK1E-206ENST00000413574 FLI1Q01543 452 aaPredicted RBP22.14■■□□□ 1.14
CSNK1E-206ENST00000413574 TMEM208Q9BTX3 173 aa22.14■■□□□ 1.14
CSNK1E-206ENST00000413574 Q6ZQT7 251 aa22.13■■□□□ 1.13
CSNK1E-206ENST00000413574 TCEAL7Q9BRU2 100 aa22.13■■□□□ 1.13
CSNK1E-206ENST00000413574 F6UZH7 168 aa22.13■■□□□ 1.13
CSNK1E-206ENST00000413574 LENEPQ9Y5L5 61 aa22.13■■□□□ 1.13
CSNK1E-206ENST00000413574 MEF2BQ02080 365 aaPredicted RBP22.12■■□□□ 1.13
CSNK1E-206ENST00000413574 TREM1Q9NP99 234 aa22.12■■□□□ 1.13
CSNK1E-206ENST00000413574 TRBV7-9A0A0J9YWB2 115 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 LOC102723971A0A1B0GUV8 181 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 C7orf71A4D174 169 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 DEFB4AO15263 64 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 NMBP08949 121 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 IFITM2Q01629 132 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 VAX2Q9UIW0 290 aa22.11■■□□□ 1.13
CSNK1E-206ENST00000413574 C2CD4CQ8TF44 421 aa22.1■■□□□ 1.13
CSNK1E-206ENST00000413574 C8orf49Q96NF6 230 aa22.1■■□□□ 1.13
CSNK1E-206ENST00000413574 LINC01587Q99440 93 aa22.1■■□□□ 1.13
CSNK1E-206ENST00000413574 AKR1C3P42330 323 aa22.09■■□□□ 1.13
CSNK1E-206ENST00000413574 Q86TA4 180 aa22.09■■□□□ 1.13
CSNK1E-206ENST00000413574 Q8NAQ8 132 aa22.09■■□□□ 1.13
CSNK1E-206ENST00000413574 KLF12Q9Y4X4 402 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms