RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 Q6Q795 121 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 ACP7Q6ZNF0 438 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 Q6ZS49 121 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 PRIMA1Q86XR5 153 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 LYPD6Q86Y78 171 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 CD177Q8N6Q3 437 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 ZNRF1Q8ND25 227 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 OR2G3Q8NGZ4 309 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 RFESDQ8TAC1 157 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 C11orf45Q8TAV5 145 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 H1FXQ92522 213 aaKnown RBP3.55□□□□□ -1.84
SF3B1-202ENST00000409915 FAM3DQ96BQ1 224 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 KCNS1Q96KK3 526 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 FAM218AQ96MZ4 157 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 GGTLC1Q9BX51 225 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 PARP12Q9H0J9 701 aaKnown RBP3.55□□□□□ -1.84
SF3B1-202ENST00000409915 OR2D2Q9H210 308 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 KLK15Q9H2R5 256 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 HES4Q9HCC6 221 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 RPRMQ9NS64 109 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 Q9UF83 564 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 AK3Q9UIJ7 227 aa3.55□□□□□ -1.84
SF3B1-202ENST00000409915 WNK2Q9Y3S1 2297 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 IGLV5-45A0A087WSX0 123 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 TRAV40A0A0B4J280 105 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 A0A1B0GX51 115 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 A0A1W2PPM0 123 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 FABP5P3A8MUU1 101 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 TNFSF12O43508 249 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF324O75467 553 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-202ENST00000409915 FSTL3O95633 263 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CA2P00918 260 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 MT-ND6P03923 174 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 C8orf88P0DMB2 117 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CT45A6P0DMU7 189 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CT45A5P0DMU8 189 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CT45A7P0DMV0 189 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 EVI2AP22794 236 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SRIP30626 198 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 FGF12P61328 243 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 RPS28P62857 69 aaKnown RBP3.54□□□□□ -1.84
SF3B1-202ENST00000409915 EDDM3AQ14507 147 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 KISS1Q15726 138 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 LRRC75BQ2VPJ9 315 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CT45A1Q5HYN5 189 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 C1orf100Q5SVJ3 147 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 ZFAND6Q6FIF0 208 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SLC25A34Q6PIV7 304 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 LCN15Q6UWW0 184 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 C1QL2Q7Z5L3 287 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF114Q8NC26 417 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 OR10G8Q8NGN5 311 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 OR2T6Q8NHC8 308 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 KIR2DL5BQ8NHK3 375 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CT45A3Q8NHU0 189 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SPATA3Q8NHX4 192 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 MRPL30Q8TCC3 161 aaKnown RBP3.54□□□□□ -1.84
SF3B1-202ENST00000409915 CYYR1Q96J86 154 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 GNB1LQ9BYB4 327 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SAMD10Q9BYL1 202 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SH3BGRL3Q9H299 93 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 RABAC1Q9UI14 185 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 WASHC3Q9Y3C0 194 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 INSIG2Q9Y5U4 225 aa3.54□□□□□ -1.84
SF3B1-202ENST00000409915 SOX21Q9Y651 276 aaPredicted RBP3.54□□□□□ -1.84
SF3B1-202ENST00000409915 FBN1P35555 2871 aaKnown RBP3.54□□□□□ -1.84
SF3B1-202ENST00000409915 MDFIC2A0A1B0GVS7 189 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 A0A1W2PRE2 83 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 A0A1W2PS18 150 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SMKR1H3BMG3 65 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 K7EMT4 169 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 NDUFB3O43676 98 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 FSHBP01225 129 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 IGHV4-38-2P0DP08 117 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SLC25A6P12236 298 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 CCL3L1P16619 93 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 VDAC1P21796 283 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 HTR1DP28221 377 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 TCTAP57738 103 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 KRTDAPP60985 99 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 CD164Q04900 197 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 PIGYQ3MUY2 71 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 KIAA1644Q3SXP7 199 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 KLF17Q5JT82 389 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-202ENST00000409915 RUSC1-AS1Q66K80 236 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SLC35E4Q6ICL7 350 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 BRD3OSQ6XYD6 125 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SPATA12Q7Z6I5 190 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.53□□□□□ -1.84
SF3B1-202ENST00000409915 OR5D14Q8NGL3 314 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 OR10G9Q8NGN4 311 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 OR10AG1Q8NH19 301 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 ZNRF2Q8NHG8 242 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 LSM10Q969L4 123 aaKnown RBP3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SMIM7Q9BQ49 75 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 ANAPC13Q9BS18 74 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 CLEC7AQ9BXN2 247 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 MRPL32Q9BYC8 188 aaKnown RBP3.53□□□□□ -1.84
SF3B1-202ENST00000409915 IFI27L2Q9H2X8 130 aa3.53□□□□□ -1.84
SF3B1-202ENST00000409915 SCRT2Q9NQ03 307 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms