RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 TSPOP30536 169 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 ZFAND6Q6FIF0 208 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 C9orf62Q8N4C0 152 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 RXFP4Q8TDU9 374 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 TMPRSS5Q9H3S3 457 aa16.09■□□□□ 0.17
PTCD3-203ENST00000409783 SLC25A5P05141 298 aaKnown RBP16.08■□□□□ 0.16
PTCD3-203ENST00000409783 LEPP41159 167 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 CSN1S1P47710 185 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 GFI1BQ5VTD9 330 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 ARL6IP6Q8N6S5 226 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 TMED6Q8WW62 240 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 ZNF492Q9P255 531 aa16.08■□□□□ 0.16
PTCD3-203ENST00000409783 UMAD1C9J7I0 102 aa16.07■□□□□ 0.16
PTCD3-203ENST00000409783 CRISP2P16562 243 aa16.07■□□□□ 0.16
PTCD3-203ENST00000409783 FGF8P55075 233 aaPredicted RBP16.07■□□□□ 0.16
PTCD3-203ENST00000409783 MAP1LC3B2A6NCE7 125 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 KLLNB2CW77 178 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 PRM2P04554 102 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 FAM74A1Q5RGS3 127 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 TMEM78Q5T7P6 136 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 ZFAND2AQ8N6M9 145 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 C20orf144Q9BQM9 153 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 TMEM208Q9BTX3 173 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 MAP1LC3BQ9GZQ8 125 aa16.06■□□□□ 0.16
PTCD3-203ENST00000409783 GGTLC3B5MD39 225 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 HBE1P02100 147 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 ZNF138P52744 262 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 GNG5P63218 68 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 ZFP69Q49AA0 526 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 TMEM256Q8N2U0 113 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 C11orf45Q8TAV5 145 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 CMTM2Q8TAZ6 248 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 MBD3L1Q8WWY6 194 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 CELA1Q9UNI1 258 aa16.05■□□□□ 0.16
PTCD3-203ENST00000409783 DYNC2H1Q8NCM8 4307 aaKnown RBP16.04■□□□□ 0.16
PTCD3-203ENST00000409783 A0A1W2PRE2 83 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 ZNF705GA8MUZ8 300 aaPredicted RBP16.04■□□□□ 0.16
PTCD3-203ENST00000409783 J3KRW8 73 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 NMBP08949 121 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 NANOS2P60321 138 aaKnown RBP16.04■□□□□ 0.16
PTCD3-203ENST00000409783 RRN3P1Q2M238 152 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 SLC51BQ86UW2 128 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 IQCF2Q8IXL9 164 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 Q8TAT8 98 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 FAM213BQ8TBF2 198 aa16.04■□□□□ 0.16
PTCD3-203ENST00000409783 YTHDF2Q9Y5A9 579 aaKnown RBP16.04■□□□□ 0.16
PTCD3-203ENST00000409783 TRBV7-9A0A0J9YWB2 115 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 LOC102723971A0A1B0GUV8 181 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 SUMO1P63165 101 aaKnown RBP16.03■□□□□ 0.16
PTCD3-203ENST00000409783 PRR9Q5T870 116 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 DPPA3Q6W0C5 159 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 GOLT1AQ6ZVE7 132 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 C5orf17Q8NAS9 161 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 LINC01587Q99440 93 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 RPH3ALQ9UNE2 315 aa16.03■□□□□ 0.16
PTCD3-203ENST00000409783 TRAV12-3A0A0B4J271 114 aa16.02■□□□□ 0.16
PTCD3-203ENST00000409783 TMEM189A5PLL7 270 aa16.02■□□□□ 0.16
PTCD3-203ENST00000409783 AZU1P20160 251 aa16.02■□□□□ 0.16
PTCD3-203ENST00000409783 TAS2R60P59551 318 aa16.02■□□□□ 0.16
PTCD3-203ENST00000409783 PLAC8L1A1L4L8 177 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 C7orf71A4D174 169 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 H7BYZ3 331 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 ZNF324O75467 553 aaPredicted RBP16.01■□□□□ 0.15
PTCD3-203ENST00000409783 TCRAP04437 139 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 BTN1A1Q13410 526 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 PMS2P11Q13670 270 aa16.01■□□□□ 0.15
PTCD3-203ENST00000409783 FAM74A7A6NL05 159 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 UBE2G2P60604 165 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 SFT2D1Q8WV19 159 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 EPDR1Q9UM22 224 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 LENEPQ9Y5L5 61 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 TENM2Q9NT68 2774 aa16■□□□□ 0.15
PTCD3-203ENST00000409783 TRAV8-1A0A0A6YYK1 113 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 CXorf65A6NEN9 183 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 GPX1P07203 203 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 RNASE4P34096 147 aaKnown RBP15.99■□□□□ 0.15
PTCD3-203ENST00000409783 NKX2-5P52952 324 aaPredicted RBP15.99■□□□□ 0.15
PTCD3-203ENST00000409783 EMP1P54849 157 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 Q6ZQT7 251 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 TVP23CQ96ET8 276 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 DKK2Q9UBU2 259 aa15.99■□□□□ 0.15
PTCD3-203ENST00000409783 KMT2CQ8NEZ4 4911 aaKnown RBP15.99■□□□□ 0.15
PTCD3-203ENST00000409783 PLECQ15149 4684 aaKnown RBP15.98■□□□□ 0.15
PTCD3-203ENST00000409783 SERTM2A0A1B0GWG4 89 aa15.98■□□□□ 0.15
PTCD3-203ENST00000409783 SULT1A2P50226 295 aa15.98■□□□□ 0.15
PTCD3-203ENST00000409783 C12orf74Q32Q52 190 aa15.98■□□□□ 0.15
PTCD3-203ENST00000409783 EIF5AL1Q6IS14 154 aaKnown RBP15.98■□□□□ 0.15
PTCD3-203ENST00000409783 NIPSNAP3BQ9BS92 247 aa15.98■□□□□ 0.15
PTCD3-203ENST00000409783 IGLV2-11P01706 119 aa15.97■□□□□ 0.15
PTCD3-203ENST00000409783 H2AFB1P0C5Y9 115 aa15.97■□□□□ 0.15
PTCD3-203ENST00000409783 RAB5CP51148 216 aa15.97■□□□□ 0.15
PTCD3-203ENST00000409783 CEMP1Q6PRD7 247 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-203ENST00000409783 CCDC28AQ8IWP9 274 aa15.97■□□□□ 0.15
PTCD3-203ENST00000409783 RNASE8Q8TDE3 154 aaKnown RBP15.97■□□□□ 0.15
PTCD3-203ENST00000409783 PHLDA1Q8WV24 401 aaPredicted RBP15.97■□□□□ 0.15
PTCD3-203ENST00000409783 SPART-AS1P0CW21 52 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 HTN1P15515 57 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 FAM222AQ5U5X8 452 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 Q6ZTC4 211 aa15.96■□□□□ 0.15
PTCD3-203ENST00000409783 SGK494Q96LW2 274 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms