RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 HSD17B11Q8NBQ5 300 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 ZNF680Q8NEM1 530 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 SCGB1C1Q8TD33 95 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 TMEM37Q8WXS4 190 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 EEF1AKMT3Q96AZ1 226 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 GNPNAT1Q96EK6 184 aaPredicted RBP2.98□□□□□ -1.93
CLK1-203ENST00000409769 ACY3Q96HD9 319 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 UBE2E2Q96LR5 201 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 S4R3C0 116 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 NF1P21359 2839 aa2.98□□□□□ -1.93
CLK1-203ENST00000409769 A0A0G2JLM5 398 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 A0A1B0GUS0 222 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 WI2-2373I1.2A0A1W2PRP0 233 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SMCO3A2RU48 225 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 ZFP92A6NM28 416 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SEC14L6B5MCN3 397 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 C17orf112F2Z3M2 114 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 I3L521 148 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 TGOLN2O43493 480 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 GNG7O60262 68 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 ATP6V1G1O75348 118 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 TRBV12-3P01733 135 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 IGHV3-11P01762 117 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 LGALS1P09382 135 aaKnown RBP2.97□□□□□ -1.93
CLK1-203ENST00000409769 CAMLGP49069 296 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SULT1A2P50226 295 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 B2MP61769 119 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SELENOTP62341 195 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SERF2P84101 59 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 ZNF726P1Q15940 193 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 TIGITQ495A1 244 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 Q56UQ5 140 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 MIC13Q5XKP0 118 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 EIF5AL1Q6IS14 154 aaKnown RBP2.97□□□□□ -1.93
CLK1-203ENST00000409769 ALKAL2Q6UX46 152 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 CLEC19AQ6UXS0 136 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 CYP2G1PQ6ZSU1 146 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 ZNF767PQ75MW2 155 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 BPIFCQ8NFQ6 507 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 OR5AU1Q8NGC0 362 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 OR4X2Q8NGF9 303 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 CHRDL1Q9BU40 450 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 VSIRQ9H7M9 311 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 KCNIP2Q9NS61 270 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 ZNF355PQ9NSJ1 428 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 SLC39A9Q9NUM3 307 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 PXMP4Q9Y6I8 212 aa2.97□□□□□ -1.93
CLK1-203ENST00000409769 OR2T8A6NH00 312 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 UMAD1C9J7I0 102 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 PPP5D1E7EU14 171 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 NUPL2O15504 423 aaKnown RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 IFNA7P01567 189 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 MBP02144 154 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 NMBP08949 121 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 OR5G3P0C626 314 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RD3LP0DJH9 198 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 CD28P10747 220 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 M6PRP20645 277 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RAB5CP51148 216 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RAB2AP61019 212 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 ZNF616Q08AN1 781 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RAB31Q13636 194 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 USF2Q15853 346 aaPredicted RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 TMEM41BQ5BJD5 291 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 GCSAMLQ5JQS6 135 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 CLLU1Q5K131 121 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 FAM74A1Q5RGS3 127 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 C9orf129Q5T035 196 aaKnown RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 UNQ9165/PRO28630Q6UXU0 137 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 PATE2Q6UY27 113 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 DPPA3Q6W0C5 159 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 SSX7Q7RTT5 188 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 GPHB5Q86YW7 130 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 KRTAP11-1Q8IUC1 163 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RPP25LQ8N5L8 163 aaKnown RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 OR51G1Q8NGK1 321 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 LYPD6BQ8NI32 183 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 LRRC20Q8TCA0 184 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 C4orf3Q8WVX3 66 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 MBD3L1Q8WWY6 194 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 RPRMQ9NS64 109 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 MRPL27Q9P0M9 148 aaKnown RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 PEF1Q9UBV8 284 aaKnown RBP2.96□□□□□ -1.94
CLK1-203ENST00000409769 PUS1Q9Y606 427 aaKnown RBP eCLIP2.96□□□□□ -1.94
CLK1-203ENST00000409769 ATRQ13535 2644 aa2.96□□□□□ -1.94
CLK1-203ENST00000409769 SORL1Q92673 2214 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 TRAV1-1A0A0B4J248 108 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 TRBV7-9A0A0J9YWB2 115 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 CTXND1A0A1B0GTU2 59 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 A8MWP6 167 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 H3BRN7 92 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 LGALS9O00182 355 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 NDUFA4O00483 81 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 MRPS12O15235 138 aaKnown RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 GGCTO75223 188 aaKnown RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 SCGB2A1O75556 95 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 HSPB1P04792 205 aaKnown RBP2.95□□□□□ -1.94
CLK1-203ENST00000409769 FABP1P07148 127 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 STAG3L2P0CL84 134 aa2.95□□□□□ -1.94
CLK1-203ENST00000409769 STAG3L3P0CL85 134 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms