RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 TMEM78Q5T7P6 136 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 TMEM256Q8N2U0 113 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 ARL6IP6Q8N6S5 226 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 CMTM2Q8TAZ6 248 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 FAM19A4Q96LR4 140 aa14.29□□□□□ -0.12
PDLIM2-207ENST00000409417 TMEM189A5PLL7 270 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 UMAD1C9J7I0 102 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 DIRC3C9JPN6 131 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 SLC25A5P05141 298 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 TPT1P13693 172 aaKnown RBP14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 CD300CQ08708 224 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 KIR3DS1Q14943 382 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 RRN3P1Q2M238 152 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 STOML3Q8TAV4 291 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 C20orf144Q9BQM9 153 aa14.28□□□□□ -0.12
PDLIM2-207ENST00000409417 NMBP08949 121 aa14.27□□□□□ -0.12
PDLIM2-207ENST00000409417 GFI1BQ5VTD9 330 aa14.27□□□□□ -0.12
PDLIM2-207ENST00000409417 LINC01587Q99440 93 aa14.27□□□□□ -0.12
PDLIM2-207ENST00000409417 PLA2G2EQ9NZK7 142 aa14.27□□□□□ -0.12
PDLIM2-207ENST00000409417 ZNF492Q9P255 531 aa14.27□□□□□ -0.12
PDLIM2-207ENST00000409417 CXorf65A6NEN9 183 aa14.26□□□□□ -0.13
PDLIM2-207ENST00000409417 ZNF138P52744 262 aa14.26□□□□□ -0.13
PDLIM2-207ENST00000409417 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
PDLIM2-207ENST00000409417 IQCF2Q8IXL9 164 aa14.26□□□□□ -0.13
PDLIM2-207ENST00000409417 TRBV7-9A0A0J9YWB2 115 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 LOC102723971A0A1B0GUV8 181 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 MAP1LC3B2A6NCE7 125 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 KLLNB2CW77 178 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 H7BYZ3 331 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 CRISP2P16562 243 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 FHITP49789 147 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 TAS2R60P59551 318 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 PMS2P11Q13670 270 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 TMED6Q8WW62 240 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 MAP1LC3BQ9GZQ8 125 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 ZNF705GA8MUZ8 300 aaPredicted RBP14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 J3KRW8 73 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 EMP1P54849 157 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 C5orf17Q8NAS9 161 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 TMPRSS5Q9H3S3 457 aa14.25□□□□□ -0.13
PDLIM2-207ENST00000409417 STARD9Q9P2P6 4700 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 A0A1W2PRE2 83 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 PRM2P04554 102 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 FGF8P55075 233 aaPredicted RBP14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 ZFP69Q49AA0 526 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 DPPA3Q6W0C5 159 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 Q8TAT8 98 aa14.24□□□□□ -0.13
PDLIM2-207ENST00000409417 TRAV12-3A0A0B4J271 114 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 NUPR2A6NF83 97 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 GGTLC3B5MD39 225 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 GPX1P07203 203 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 SUMO1P63165 101 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 EIF5AL1Q6IS14 154 aaKnown RBP14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 GOLT1AQ6ZVE7 132 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 FAM213BQ8TBF2 198 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 NIPSNAP3BQ9BS92 247 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 RPH3ALQ9UNE2 315 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 CELA1Q9UNI1 258 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 LENEPQ9Y5L5 61 aa14.23□□□□□ -0.13
PDLIM2-207ENST00000409417 C7orf71A4D174 169 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 SPART-AS1P0CW21 52 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 HTN1P15515 57 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 RNASE4P34096 147 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 GNG5P63218 68 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 CEMP1Q6PRD7 247 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 SLC51BQ86UW2 128 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 C9orf62Q8N4C0 152 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 PHLDA1Q8WV24 401 aaPredicted RBP14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 MBD3L1Q8WWY6 194 aa14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 YTHDF2Q9Y5A9 579 aaKnown RBP14.22□□□□□ -0.13
PDLIM2-207ENST00000409417 TEX48A0A1B0GUV7 120 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 SERTM2A0A1B0GWG4 89 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 TCRAP04437 139 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 AZU1P20160 251 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 SFT2D1Q8WV19 159 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 NKX6-2Q9C056 277 aaPredicted RBP14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 DKK2Q9UBU2 259 aa14.21□□□□□ -0.13
PDLIM2-207ENST00000409417 ZNF324O75467 553 aaPredicted RBP14.2□□□□□ -0.14
PDLIM2-207ENST00000409417 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
PDLIM2-207ENST00000409417 ZNF493Q6ZR52 646 aa14.2□□□□□ -0.14
PDLIM2-207ENST00000409417 EPDR1Q9UM22 224 aa14.2□□□□□ -0.14
PDLIM2-207ENST00000409417 KMT2CQ8NEZ4 4911 aaKnown RBP14.2□□□□□ -0.14
PDLIM2-207ENST00000409417 FAM74A7A6NL05 159 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 RAB5CP51148 216 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 UBE2G2P60604 165 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 BTN1A1Q13410 526 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 FAM222AQ5U5X8 452 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 C16orf74Q96GX8 76 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 PYGO2Q9BRQ0 406 aa14.19□□□□□ -0.14
PDLIM2-207ENST00000409417 TRAV8-1A0A0A6YYK1 113 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 K7EQM0 130 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 PRR9Q5T870 116 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 Q6ZTC4 211 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 TMEM263Q8WUH6 116 aaKnown RBP14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 KLK5Q9Y337 293 aaPredicted RBP14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 PLAC8L1A1L4L8 177 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 C11orf94C9JXX5 98 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 H2AFB1P0C5Y9 115 aa14.18□□□□□ -0.14
PDLIM2-207ENST00000409417 CCDC28AQ8IWP9 274 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms