RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 CRLF1O75462 422 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 IGKV1-39P01597 117 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 IGLV3-1P01715 115 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 IGKV1D-39P04432 117 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 HILS1P60008 231 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 UBE2BP63146 152 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 PAX2Q02962 417 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 C15orf53Q8NAA6 179 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 SPATA25Q9BR10 227 aa3.94□□□□□ -1.78
SCN3A-203ENST00000409101 MYMXA0A1B0GTQ4 84 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 LEPROTO15243 131 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 CFPP27918 469 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 DEFB135Q30KP9 77 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 PRR31Q5SQ13 230 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 Q8N9W7 124 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 Q6ZQT7 251 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 PYGO2Q9BRQ0 406 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 C1orf43Q9BWL3 253 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 GFRA4Q9GZZ7 299 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 GSN-AS1Q9NRJ2 163 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM242Q9NWH2 141 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM238C9JI98 176 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 IGLC1P0CG04 106 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 NIT1Q86X76 327 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 ZNF491Q8N8L2 437 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 TM2D2Q9BX73 214 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 LY96Q9Y6Y9 160 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 UBE2CO00762 179 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 SRSF2Q01130 221 aaKnown RBP3.93□□□□□ -1.78
SCN3A-203ENST00000409101 FAM19A2Q8N3H0 131 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 C11orf45Q8TAV5 145 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 CFHR4Q92496 578 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 A8MXK9 166 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 IGHG2P01859 326 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 GATD1Q8NB37 220 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 LAMTOR2Q9Y2Q5 125 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 ADAMTS9Q9P2N4 1935 aa3.93□□□□□ -1.78
SCN3A-203ENST00000409101 TNFRSF6BO95407 300 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGHV3-30P01768 117 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGHV3-33P01772 117 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 SMIM6P0DI80 62 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGHV3-30-5P0DP03 117 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGLL1P15814 213 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 CLPSL2Q6UWE3 100 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 TIMM21Q9BVV7 248 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 MYLKQ15746 1914 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 TRAV1-1A0A0B4J248 108 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 GYPEP15421 78 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 LMO4P61968 165 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM141Q96I45 108 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 RITA1Q96K30 269 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 ARHGEF17Q96PE2 2063 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-203ENST00000409101 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IGLC7A0M8Q6 106 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 PRSS29PA6NIE9 313 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 PRSS46E5RG02 174 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 SNAI2O43623 268 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 ZNF493Q6ZR52 646 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 ZNF114Q8NC26 417 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 NUP35Q8NFH5 326 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 IFI27L1Q96BM0 104 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 ZNF492Q9P255 531 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 F6UB75 175 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 PRIMA1Q86XR5 153 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 CARHSP1Q9Y2V2 147 aaKnown RBP3.92□□□□□ -1.78
SCN3A-203ENST00000409101 SMKR1H3BMG3 65 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 POU2AF1Q16633 256 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 ANAPC10Q9UM13 185 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 RP1P56715 2156 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 SVILO95425 2214 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 H3BMM0 161 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 PMVKQ15126 192 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 COL5A1-AS1Q5SY13 56 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 UBE2WQ96B02 151 aa3.92□□□□□ -1.78
SCN3A-203ENST00000409101 SPTBP11277 2137 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 PLXND1Q9Y4D7 1925 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 K7EMT4 169 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 K7EQD1 137 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 RPL18AQ02543 176 aaKnown RBP3.91□□□□□ -1.78
SCN3A-203ENST00000409101 GPHB5Q86YW7 130 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 TMEM126AQ9H061 195 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 SIGLEC8Q9NYZ4 499 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 CACNA1EQ15878 2313 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 IGLV11-55A0A075B6I3 123 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 RBAKDNA6NC62 111 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 DEFB4AO15263 64 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 GUSBP1Q15486 140 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 DEFB125Q8N687 156 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 LAMTOR3Q9UHA4 124 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 TP53TG1Q9Y2A0 90 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 HLA-DRB4P13762 266 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 Q6ZWC4 215 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 HLA-DRB4X5D2U9 266 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 SERF1AO75920 110 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 C16orf54Q6UWD8 224 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 AMN1Q8IY45 258 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 MBD6Q96DN6 1003 aa3.91□□□□□ -1.78
SCN3A-203ENST00000409101 C1orf147Q96MC9 270 aaPredicted RBP3.91□□□□□ -1.78
SCN3A-203ENST00000409101 TIRAPP58753 221 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms