RNA–Protein interactions for RNA: ENST00000406072.5

HDAC9-203, Transcript of histone deacetylase 9, humanhuman

TSL 5 BASIC

Gene HDAC9, Length 4,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-203ENST00000406072 C8orf46Q8TAG6 207 aa4.71□□□□□ -1.65
HDAC9-203ENST00000406072 PRADC1Q9BSG0 188 aa4.71□□□□□ -1.65
HDAC9-203ENST00000406072 C11orf1Q9H5F2 150 aa4.71□□□□□ -1.65
HDAC9-203ENST00000406072 ZNF492Q9P255 531 aa4.71□□□□□ -1.65
HDAC9-203ENST00000406072 PPP1R17O96001 155 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 FAM201AQ5SY85 155 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 SLC25A39Q9BZJ4 359 aaPredicted RBP4.71□□□□□ -1.66
HDAC9-203ENST00000406072 FAM236AA0A1B0GUQ0 79 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 FAM236BA0A1B0GV22 79 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 LINC00310P59036 64 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 DUX4L9Q6RFH8 374 aaPredicted RBP4.71□□□□□ -1.66
HDAC9-203ENST00000406072 ANKRD29Q8N6D5 301 aa4.71□□□□□ -1.66
HDAC9-203ENST00000406072 MRPL20Q9BYC9 149 aaKnown RBP4.71□□□□□ -1.66
HDAC9-203ENST00000406072 M0QXV9 152 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 IGKV3-15P01624 115 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 INSL3P51460 131 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 Q6ZR03 302 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 GGNQ86UU5 652 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RNF182Q8N6D2 247 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 ABCA4P78363 2273 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 IGKV2-40A0A087WW87 121 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 IGHV3-49A0A0A0MS15 119 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RS1O15537 224 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 SH2D1AO60880 128 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 IGKV2D-40P01614 121 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RFPL3SP0C7P2 107 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RSPO1Q2MKA7 263 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 Q6P435 159 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 NCOA6Q14686 2063 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 WNK1Q9H4A3 2382 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 SUMO2P61956 95 aaKnown RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 FAM120AOSQ5T036 256 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 Q8TAT8 98 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 COPS9Q8WXC6 57 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 SPATA25Q9BR10 227 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 HIGD1BQ9P298 99 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 SLC25A15Q9Y619 301 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 HLA-DMBP28068 263 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 Q8N976 141 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 FAM57AQ8TBR7 257 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RAB1BQ9H0U4 201 aa4.7□□□□□ -1.66
HDAC9-203ENST00000406072 RPUSD1Q9UJJ7 312 aaKnown RBP4.7□□□□□ -1.66
HDAC9-203ENST00000406072 IGHV3-66A0A0C4DH42 116 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 EFNA4P52798 201 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 FOXG1P55316 489 aaPredicted RBP4.69□□□□□ -1.66
HDAC9-203ENST00000406072 PRR20EP86478 221 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 PRR20CP86479 221 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 PRR20DP86480 221 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 PRR20BP86481 221 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 PRR20AP86496 221 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 GPR179Q6PRD1 2367 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 E9PLD3 99 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 F8VRH5 84 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 CCDC179H3BU77 68 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 FAM106CPP0CH98 169 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 RNASE2P10153 161 aaKnown RBP4.69□□□□□ -1.66
HDAC9-203ENST00000406072 XGP55808 180 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 FAM106AQ4KMX7 169 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 UFSP1Q6NVU6 142 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 C2CD3Q4AC94 2353 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 IGHV3-23P01764 117 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 ECSCRQ19T08 205 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 Q6ZS92 163 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 ATP6V0E2Q8NHE4 81 aa4.69□□□□□ -1.66
HDAC9-203ENST00000406072 RIF1Q5UIP0 2472 aaKnown RBP4.68□□□□□ -1.66
HDAC9-203ENST00000406072 IGKV3D-20A0A0C4DH25 116 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 ZNF415Q09FC8 603 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 CARD19Q96LW7 228 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 METRNQ9UJH8 293 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 TRAV21A0A0B4J279 112 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 K7ENP7 123 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 ATP5J2P56134 94 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 GDF5OSQ5U4N7 250 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 FAM216BQ8N7L0 139 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 SPANXDQ9BXN6 97 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 TMEM133Q9H2Q1 129 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 NPFFO15130 113 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 CFC1BP0CG36 223 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 CFC1P0CG37 223 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 C2orf91Q6ZV80 131 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 IL17RELQ6ZVW7 336 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 TTTY12Q9BZ98 90 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 SPANXCQ9NY87 97 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 NCKAP5O14513 1909 aa4.68□□□□□ -1.66
HDAC9-203ENST00000406072 PRSS46E5RG02 174 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 IGLV3-1P01715 115 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 LGALS1P09382 135 aaKnown RBP4.67□□□□□ -1.66
HDAC9-203ENST00000406072 C19orf54Q5BKX5 351 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 Q8N8P6 123 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 ZNF625Q96I27 306 aaPredicted RBP4.67□□□□□ -1.66
HDAC9-203ENST00000406072 METTL26Q96S19 204 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 C11orf68Q9H3H3 251 aaKnown RBP4.67□□□□□ -1.66
HDAC9-203ENST00000406072 YLPM1P49750 1951 aaKnown RBP4.67□□□□□ -1.66
HDAC9-203ENST00000406072 TRAV13-1A0A0B4J241 112 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 TRAV17A0A0B4J275 112 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 IGKV1-16P04430 117 aa4.67□□□□□ -1.66
HDAC9-203ENST00000406072 C2orf66Q6UXQ4 117 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms