RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 ZNF674Q2M3X9 581 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 Q86TA4 180 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 LINC00479Q96M42 142 aa16.32■□□□□ 0.2
EPCAM-202ENST00000405271 TRAV8-1A0A0A6YYK1 113 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 TRAV34A0A0B4J273 112 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 F6UB75 175 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 DUSP14O95147 198 aaKnown RBP16.31■□□□□ 0.2
EPCAM-202ENST00000405271 IGLV2-11P01706 119 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 CD7P09564 240 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 PRB4P10163 310 aaPredicted RBP16.31■□□□□ 0.2
EPCAM-202ENST00000405271 EGFEM1PQ0D2K5 195 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 TMEM78Q5T7P6 136 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 VGLL1Q99990 258 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 SEC11CQ9BY50 192 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 PSG8Q9UQ74 426 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 TGP01266 2768 aa16.31■□□□□ 0.2
EPCAM-202ENST00000405271 PRKDCP78527 4128 aaKnown RBP16.31■□□□□ 0.2
EPCAM-202ENST00000405271 HLA-DRB4P13762 266 aa16.3■□□□□ 0.2
EPCAM-202ENST00000405271 DEFB1P60022 68 aa16.3■□□□□ 0.2
EPCAM-202ENST00000405271 LINC00477Q96M19 166 aa16.3■□□□□ 0.2
EPCAM-202ENST00000405271 PPP1R14DQ9NXH3 145 aa16.3■□□□□ 0.2
EPCAM-202ENST00000405271 HLA-DRB4X5D2U9 266 aa16.3■□□□□ 0.2
EPCAM-202ENST00000405271 KRBOX1C9JBD0 128 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 F8W036 122 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 ADCYAP1P18509 176 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 CENPWQ5EE01 88 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 GDF5OSQ5U4N7 250 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 IGF2BP2-AS1Q96M15 143 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 AGPAT4-IT1Q9H0P7 198 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 C19orf73Q9NVV2 129 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 LTAP01374 205 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 GNG4P50150 75 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF138P52744 262 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 ERCC8Q13216 396 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 PRNTQ86SH4 94 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 APRG1Q8IVJ8 170 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 SMIM12Q96EX1 92 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 SGK494Q96LW2 274 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 NDFIP1Q9BT67 221 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF492Q9P255 531 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 LENEPQ9Y5L5 61 aa16.29■□□□□ 0.2
EPCAM-202ENST00000405271 PRB2P02812 416 aaPredicted RBP16.28■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF705DP0CH99 300 aaPredicted RBP16.28■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF705BP0CI00 300 aaPredicted RBP16.28■□□□□ 0.2
EPCAM-202ENST00000405271 ODF3Q96PU9 254 aa16.28■□□□□ 0.2
EPCAM-202ENST00000405271 NIPSNAP3BQ9BS92 247 aa16.28■□□□□ 0.2
EPCAM-202ENST00000405271 ZFP30Q9Y2G7 519 aa16.28■□□□□ 0.2
EPCAM-202ENST00000405271 TRBV20OR9-2A0A075B6H5 130 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 KNCNA6PVL3 124 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 A8MTW9 85 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 ZNF124Q15973 351 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 ACTL10Q5JWF8 245 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 Q8TAT8 98 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 NAT8Q9UHE5 227 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 LY96Q9Y6Y9 160 aa16.27■□□□□ 0.2
EPCAM-202ENST00000405271 TRBV7-9A0A0J9YWB2 115 aa16.26■□□□□ 0.19
EPCAM-202ENST00000405271 SAPCD1Q5SSQ6 148 aa16.26■□□□□ 0.19
EPCAM-202ENST00000405271 C10orf91Q5T1B1 145 aa16.26■□□□□ 0.19
EPCAM-202ENST00000405271 BAGE2Q86Y30 109 aa16.26■□□□□ 0.19
EPCAM-202ENST00000405271 CLUHP3Q96NS8 147 aa16.26■□□□□ 0.19
EPCAM-202ENST00000405271 CARHSP1Q9Y2V2 147 aaKnown RBP16.26■□□□□ 0.19
EPCAM-202ENST00000405271 H3BMM0 161 aa16.25■□□□□ 0.19
EPCAM-202ENST00000405271 PRR25Q96S07 402 aa16.25■□□□□ 0.19
EPCAM-202ENST00000405271 TMEM241Q24JQ0 296 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 STHQ8IWL8 128 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 TMEM183AQ8IXX5 376 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 OR4B1Q8NGF8 309 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 CT45A10P0DMU9 189 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 FAM19A4Q96LR4 140 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 WFDC10AQ9H1F0 79 aa16.24■□□□□ 0.19
EPCAM-202ENST00000405271 PNRC1Q12796 327 aaPredicted RBP16.23■□□□□ 0.19
EPCAM-202ENST00000405271 TRPT1Q86TN4 253 aaKnown RBP16.23■□□□□ 0.19
EPCAM-202ENST00000405271 MLST8Q9BVC4 326 aa16.23■□□□□ 0.19
EPCAM-202ENST00000405271 SDF2L1Q9HCN8 221 aa16.23■□□□□ 0.19
EPCAM-202ENST00000405271 ATP6V1G1O75348 118 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 IGLV2-8P01709 118 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 CRISP2P16562 243 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 LEPP41159 167 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 KRTAP10-11P60412 298 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 COX8CQ7Z4L0 72 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 TVP23CQ96ET8 276 aa16.22■□□□□ 0.19
EPCAM-202ENST00000405271 PGPEP1LA6NFU8 196 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 AMTNQ6UX39 209 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 LINC01551Q86U37 167 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 Q8N1Y9 231 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 OCC1Q8TAD7 63 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 BIN3Q9NQY0 253 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 DNAH3Q8TD57 4116 aa16.21■□□□□ 0.19
EPCAM-202ENST00000405271 TSPOP30536 169 aa16.2■□□□□ 0.18
EPCAM-202ENST00000405271 NHLRC2Q8NBF2 726 aa16.2■□□□□ 0.18
EPCAM-202ENST00000405271 C8orf49Q96NF6 230 aa16.2■□□□□ 0.18
EPCAM-202ENST00000405271 ASCL2Q99929 193 aa16.2■□□□□ 0.18
EPCAM-202ENST00000405271 IGKV3-20P01619 116 aa16.19■□□□□ 0.18
EPCAM-202ENST00000405271 RPL23P62829 140 aaKnown RBP16.19■□□□□ 0.18
EPCAM-202ENST00000405271 SMUG1Q53HV7 270 aa16.19■□□□□ 0.18
EPCAM-202ENST00000405271 DEFB125Q8N687 156 aa16.19■□□□□ 0.18
EPCAM-202ENST00000405271 RBMY1BA6NDE4 496 aaKnown RBP16.19■□□□□ 0.18
EPCAM-202ENST00000405271 RBMY1EA6NEQ0 496 aaKnown RBP16.19■□□□□ 0.18
EPCAM-202ENST00000405271 RBMY1DP0C7P1 496 aaKnown RBP16.19■□□□□ 0.18
EPCAM-202ENST00000405271 MGST1P10620 155 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms