RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SNAI2O43623 268 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 OCIAD2Q56VL3 154 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 PRR25Q96S07 402 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 NPFFR1Q9GZQ6 430 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 RPL7P18124 248 aaKnown RBP15.45■□□□□ 0.06
CCDC47-202ENST00000403162 CEACAM3P40198 252 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 C5orf64Q2M2E5 130 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 HILPDAQ9Y5L2 63 aa15.45■□□□□ 0.06
CCDC47-202ENST00000403162 UTP20O75691 2785 aaKnown RBP15.44■□□□□ 0.06
CCDC47-202ENST00000403162 IGKV2-40A0A087WW87 121 aaPredicted RBP15.44■□□□□ 0.06
CCDC47-202ENST00000403162 IGKV2D-40P01614 121 aaPredicted RBP15.44■□□□□ 0.06
CCDC47-202ENST00000403162 CACNG7P62955 275 aa15.44■□□□□ 0.06
CCDC47-202ENST00000403162 RABAC1Q9UI14 185 aa15.44■□□□□ 0.06
CCDC47-202ENST00000403162 RNF151Q2KHN1 245 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 OR9G4Q8NGQ1 327 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 SIVA1O15304 175 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 IGLC6P0CF74 106 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 EGR2P11161 476 aaPredicted RBP15.43■□□□□ 0.06
CCDC47-202ENST00000403162 FER1L6-AS1Q8NA97 138 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 IGFBPL1Q8WX77 278 aa15.43■□□□□ 0.06
CCDC47-202ENST00000403162 SMAD7O15105 426 aaKnown RBP15.42■□□□□ 0.06
CCDC47-202ENST00000403162 CKS2P33552 79 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 BMI1P35226 326 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 SRSF2Q01130 221 aaKnown RBP15.42■□□□□ 0.06
CCDC47-202ENST00000403162 TTC9CQ8N5M4 171 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 IFI27L1Q96BM0 104 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 C21orf62Q9NYP8 219 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 DCHS2Q6V1P9 2916 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 NPYP01303 97 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 ZNF562Q6V9R5 426 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 ARPC1AQ92747 370 aa15.42■□□□□ 0.06
CCDC47-202ENST00000403162 TENM4Q6N022 2769 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 GAGE12BA1L429 117 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 A6NDN8 102 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 ODF3BA8MYP8 253 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 H3BRM9 83 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 LY6HO94772 140 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 HSD52Q0P140 79 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 TWIST1Q15672 202 aa15.41■□□□□ 0.06
CCDC47-202ENST00000403162 HES1Q14469 280 aa15.4■□□□□ 0.06
CCDC47-202ENST00000403162 LINC01546A6NGU7 62 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 C9orf118A6NHY6 69 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 M0R1W7 72 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 ZNF80P51504 273 aaPredicted RBP15.39■□□□□ 0.05
CCDC47-202ENST00000403162 OR4X2Q8NGF9 303 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 THYN1Q9P016 225 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 SMKR1H3BMG3 65 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 FXYD7P58549 80 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 NDPQ00604 133 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 ZNF575Q86XF7 245 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 VGLL1Q99990 258 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 CNFNQ9BYD5 112 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 SMAD5-AS1Q9Y6J3 95 aa15.39■□□□□ 0.05
CCDC47-202ENST00000403162 NDUFS7O75251 213 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 SCGB2A1O75556 95 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 IGHG4P01861 327 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 KLRD1Q13241 179 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 COTL1Q14019 142 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 UFSP1Q6NVU6 142 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 ADAMTSL5Q6ZMM2 481 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 Q8TAT8 98 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 PSMG3-AS1Q96PY0 264 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 CCL19Q99731 98 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 GAGE10A6NGK3 116 aa15.38■□□□□ 0.05
CCDC47-202ENST00000403162 PRTN3P24158 256 aa15.37■□□□□ 0.05
CCDC47-202ENST00000403162 PIFOQ8TCI5 191 aa15.37■□□□□ 0.05
CCDC47-202ENST00000403162 RNF185Q96GF1 192 aa15.37■□□□□ 0.05
CCDC47-202ENST00000403162 USP9YO00507 2555 aaPredicted RBP15.37■□□□□ 0.05
CCDC47-202ENST00000403162 A0A1W2PRD5 423 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 A0A1W2PRF3 423 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 A0A1W2PRM7 423 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 CTSGP08311 255 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 GTF2H5Q6ZYL4 71 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 VPS25Q9BRG1 176 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 MAP1LC3AQ9H492 121 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 K7ERU9 68 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 PSMG4Q5JS54 123 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 AP1S3Q96PC3 154 aa15.36■□□□□ 0.05
CCDC47-202ENST00000403162 S100A7P31151 101 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 Q8N6K4 173 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 HELZ2Q9BYK8 2649 aaKnown RBP15.35■□□□□ 0.05
CCDC47-202ENST00000403162 AKAP6Q13023 2319 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 IGHV3-23P01764 117 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 EFNA4P52798 201 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 KIR3DS1Q14943 382 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 JMJD8Q96S16 334 aa15.35■□□□□ 0.05
CCDC47-202ENST00000403162 DOPEY2Q9Y3R5 2298 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 CCDC144NLQ6NUI1 221 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 NRGNQ92686 78 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 DKK2Q9UBU2 259 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 FABP5P3A8MUU1 101 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 HLA-DMBP28068 263 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 CRYBG3Q68DQ2 2970 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 PRSS57Q6UWY2 283 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 TIMD4Q96H15 378 aa15.34■□□□□ 0.05
CCDC47-202ENST00000403162 NCBP2LA6PVI3 153 aaKnown RBP15.33■□□□□ 0.04
CCDC47-202ENST00000403162 ORM1P02763 201 aa15.33■□□□□ 0.04
CCDC47-202ENST00000403162 EBI3Q14213 229 aa15.33■□□□□ 0.04
CCDC47-202ENST00000403162 PCP2Q8IVA1 136 aa15.33■□□□□ 0.04
CCDC47-202ENST00000403162 NXT2Q9NPJ8 142 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms