RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 OR8D4Q8NGM9 314 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 UBE2WQ96B02 151 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 NAA38Q9BRA0 125 aaKnown RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 SHANK2-AS3Q9BTD1 123 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 ZNF319Q9P2F9 582 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 A0A087WV48 116 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 TRAV2A0A0B4J234 112 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 F5H768 121 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 RFPL3SP0C7P2 107 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 RPL39P5Q59GN2 51 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 SMIM2Q9BVW6 85 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 TRAV8-4A0A0B4J246 113 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 A0A0U1RQS6 177 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 SP5Q6BEB4 398 aaPredicted RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 GVQW1Q8N7I0 195 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 C2CD3Q4AC94 2353 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 EFNA2O43921 213 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 ADORA2A-AS1P86434 159 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 KLRD1Q13241 179 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 PRIMA1Q86XR5 153 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 RPRMLQ8N4K4 120 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 C18orf12Q96KH6 178 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 CITED2Q99967 270 aaPredicted RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 FOXG1P55316 489 aaPredicted RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 KLF5Q13887 457 aaPredicted RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 TMEM160Q9NX00 188 aa2.21□□□□□ -2.06
CHD9-202ENST00000398510 ZFHX2Q9C0A1 2572 aaPredicted RBP2.21□□□□□ -2.06
CHD9-202ENST00000398510 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 LINC00482Q8N8I6 264 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 FCN3O75636 299 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 MED14OSP0DP75 135 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 HLA-DMBP28068 263 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 Q5BKY6 102 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 GCSAMLQ5JQS6 135 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 FAM19A2Q8N3H0 131 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 RNF183Q96D59 192 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 RHPN1-AS1Q9BWJ2 59 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 H0YGX0 51 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 H0YIZ8 118 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 LTAP01374 205 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ATP5EP56381 51 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 LGALS9BQ3B8N2 356 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ZCCHC24Q8N2G6 241 aaKnown RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 OR10D4PQ8NGN7 298 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 PRR15LQ9BU68 103 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ATP5G1P05496 136 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 HOXB4P17483 251 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 ATP5G3P48201 142 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 RIPPLY3P57055 190 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 TMEM249Q2WGJ8 235 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 TMEM88Q6PEY1 159 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 NABP1Q96AH0 204 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 BRCA2P51587 3418 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 PRSS46E5RG02 174 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 IFITM1P13164 125 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 CRYBB3P26998 211 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 OTX1P32242 354 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 NIT1Q86X76 327 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ZNF492Q9P255 531 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 USP9XQ93008 2570 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 SHISA9B4DS77 424 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ETV2O00321 342 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 COX17Q14061 63 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 SPRR3Q9UBC9 169 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 NDUFA1O15239 70 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 C9orf106Q8NAJ2 232 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 TRBV12-3P01733 135 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 LINC00158P58513 81 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 RPL23P62829 140 aaKnown RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 TCTEX1D4Q5JR98 221 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 MSRB3Q8IXL7 192 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 WIPF2Q8TF74 440 aaPredicted RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 ZNF503Q96F45 646 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 CLUHP3Q96NS8 147 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 NDUFA4L2Q9NRX3 87 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 IGHV1-58A0A0C4DH39 117 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 IGHV7-4-1A0A0J9YVY3 117 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 LDLRAD4O15165 306 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 CR1LQ2VPA4 569 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 PIK3CD-AS1Q5SR53 167 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 FAM24BQ8N5W8 94 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 ERG28Q9UKR5 140 aa2.2□□□□□ -2.06
CHD9-202ENST00000398510 CARHSP1Q9Y2V2 147 aaKnown RBP2.2□□□□□ -2.06
CHD9-202ENST00000398510 TLN2Q9Y4G6 2542 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 RAMP1O60894 148 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 ESDP10768 282 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 HTN3P15516 51 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 ZFAND6Q6FIF0 208 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 DMRT1Q9Y5R6 373 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 HRKO00198 91 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 CGAP01215 116 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 MP68P56378 58 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 TGIF1Q15583 401 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 WFDC6Q9BQY6 131 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 MEGF9Q9H1U4 602 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 CHKB-CPT1BH3BT56 60 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 IGHV3-7P01780 117 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 GP9P14770 177 aa2.19□□□□□ -2.06
CHD9-202ENST00000398510 NANOS3P60323 173 aaKnown RBP2.19□□□□□ -2.06
CHD9-202ENST00000398510 ZNF826PQ6ZT77 177 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms