RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LINC00527Q9UJ94 153 aa8.82□□□□□ -1
HPS4-202ENST00000398145 H3BRN7 92 aa8.82□□□□□ -1
HPS4-202ENST00000398145 THBDP07204 575 aa8.82□□□□□ -1
HPS4-202ENST00000398145 DIAPH2-AS1Q14236 149 aa8.82□□□□□ -1
HPS4-202ENST00000398145 C3orf36Q3SXR2 165 aa8.82□□□□□ -1
HPS4-202ENST00000398145 FAM167A-AS1Q96KT0 104 aa8.82□□□□□ -1
HPS4-202ENST00000398145 YAE1D1Q9NRH1 226 aa8.82□□□□□ -1
HPS4-202ENST00000398145 DKK2Q9UBU2 259 aa8.82□□□□□ -1
HPS4-202ENST00000398145 A0A0G2JNJ9 132 aa8.82□□□□□ -1
HPS4-202ENST00000398145 GAGE12HA6NDE8 117 aa8.82□□□□□ -1
HPS4-202ENST00000398145 P0C879 139 aa8.82□□□□□ -1
HPS4-202ENST00000398145 CD28P10747 220 aa8.82□□□□□ -1
HPS4-202ENST00000398145 ATP5J2P56134 94 aa8.82□□□□□ -1
HPS4-202ENST00000398145 SRSF6Q13247 344 aaKnown RBP8.82□□□□□ -1
HPS4-202ENST00000398145 TMEM95Q3KNT9 176 aa8.82□□□□□ -1
HPS4-202ENST00000398145 Q9UFV3 132 aa8.82□□□□□ -1
HPS4-202ENST00000398145 H3BMG7 143 aa8.81□□□□□ -1
HPS4-202ENST00000398145 NDUFB8O95169 186 aa8.81□□□□□ -1
HPS4-202ENST00000398145 RRN3P1Q2M238 152 aa8.81□□□□□ -1
HPS4-202ENST00000398145 Q6ZS92 163 aa8.81□□□□□ -1
HPS4-202ENST00000398145 PLEKHB2Q96CS7 222 aa8.81□□□□□ -1
HPS4-202ENST00000398145 ADAMTS9Q9P2N4 1935 aa8.81□□□□□ -1
HPS4-202ENST00000398145 IGKV1OR2-108A0A075B7D4 117 aa8.81□□□□□ -1
HPS4-202ENST00000398145 TRAV41A0A0B4J266 112 aa8.81□□□□□ -1
HPS4-202ENST00000398145 NDPQ00604 133 aa8.81□□□□□ -1
HPS4-202ENST00000398145 OR13C6PQ8NH95 151 aa8.81□□□□□ -1
HPS4-202ENST00000398145 DUX3Q96PT4 197 aa8.81□□□□□ -1
HPS4-202ENST00000398145 PLXNB1O43157 2135 aa8.81□□□□□ -1
HPS4-202ENST00000398145 M0R1W7 72 aa8.81□□□□□ -1
HPS4-202ENST00000398145 PLA2G5P39877 138 aa8.81□□□□□ -1
HPS4-202ENST00000398145 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
HPS4-202ENST00000398145 PATE2Q6UY27 113 aa8.81□□□□□ -1
HPS4-202ENST00000398145 PCP2Q8IVA1 136 aa8.81□□□□□ -1
HPS4-202ENST00000398145 IGKV3OR2-268A0A0C4DH90 116 aa8.8□□□□□ -1
HPS4-202ENST00000398145 TAX1BP3O14907 124 aa8.8□□□□□ -1
HPS4-202ENST00000398145 DEFB104AQ8WTQ1 72 aa8.8□□□□□ -1
HPS4-202ENST00000398145 TRBV20-1A0A075B6N2 111 aa8.8□□□□□ -1
HPS4-202ENST00000398145 TRBV7-1A0A0A6YYK4 115 aa8.8□□□□□ -1
HPS4-202ENST00000398145 M0R2P5 195 aa8.8□□□□□ -1
HPS4-202ENST00000398145 TAL2Q16559 108 aa8.8□□□□□ -1
HPS4-202ENST00000398145 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
HPS4-202ENST00000398145 SCRT2Q9NQ03 307 aa8.8□□□□□ -1
HPS4-202ENST00000398145 F8VRH5 84 aa8.8□□□□□ -1
HPS4-202ENST00000398145 CEND1Q8N111 149 aa8.8□□□□□ -1
HPS4-202ENST00000398145 TRAV12-3A0A0B4J271 114 aa8.8□□□□□ -1
HPS4-202ENST00000398145 C9JAW5 83 aa8.8□□□□□ -1
HPS4-202ENST00000398145 K7ERJ3 54 aa8.8□□□□□ -1
HPS4-202ENST00000398145 AZU1P20160 251 aa8.8□□□□□ -1
HPS4-202ENST00000398145 ZNF491Q8N8L2 437 aa8.8□□□□□ -1
HPS4-202ENST00000398145 MOB4Q9Y3A3 225 aa8.8□□□□□ -1
HPS4-202ENST00000398145 COL8A2P25067 703 aa8.79□□□□□ -1
HPS4-202ENST00000398145 AMTNQ6UX39 209 aa8.79□□□□□ -1
HPS4-202ENST00000398145 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
HPS4-202ENST00000398145 SAP30O75446 220 aa8.79□□□□□ -1
HPS4-202ENST00000398145 DUSP14O95147 198 aaKnown RBP8.79□□□□□ -1
HPS4-202ENST00000398145 SRD5A1P18405 259 aa8.79□□□□□ -1
HPS4-202ENST00000398145 DTX2Q86UW9 622 aa8.79□□□□□ -1
HPS4-202ENST00000398145 C17orf77Q96MU5 243 aa8.79□□□□□ -1
HPS4-202ENST00000398145 SPG11Q96JI7 2443 aa8.79□□□□□ -1
HPS4-202ENST00000398145 SLC25A16P16260 332 aa8.79□□□□□ -1
HPS4-202ENST00000398145 ATXN8Q156A1 80 aa8.79□□□□□ -1
HPS4-202ENST00000398145 ZNF876PQ49A33 203 aa8.79□□□□□ -1
HPS4-202ENST00000398145 WFDC12Q8WWY7 111 aa8.79□□□□□ -1
HPS4-202ENST00000398145 IGKV3D-20A0A0C4DH25 116 aa8.78□□□□□ -1
HPS4-202ENST00000398145 E7EQL1 145 aa8.78□□□□□ -1
HPS4-202ENST00000398145 IL17RELQ6ZVW7 336 aa8.78□□□□□ -1
HPS4-202ENST00000398145 GTSF1Q8WW33 167 aa8.78□□□□□ -1
HPS4-202ENST00000398145 PPDPFLQ8WWR9 84 aa8.78□□□□□ -1
HPS4-202ENST00000398145 C7orf69Q9H7B7 122 aa8.78□□□□□ -1
HPS4-202ENST00000398145 BDP1A6H8Y1 2624 aa8.78□□□□□ -1
HPS4-202ENST00000398145 RNASE1P07998 156 aaKnown RBP8.78□□□□□ -1
HPS4-202ENST00000398145 GP9P14770 177 aa8.78□□□□□ -1
HPS4-202ENST00000398145 C2orf82Q6UX34 121 aa8.78□□□□□ -1
HPS4-202ENST00000398145 ANKHD1Q8IWZ3 2542 aaKnown RBP8.78□□□□□ -1
HPS4-202ENST00000398145 C2orf70A6NJV1 201 aa8.78□□□□□ -1
HPS4-202ENST00000398145 TMEM101Q96IK0 257 aa8.78□□□□□ -1
HPS4-202ENST00000398145 KLF12Q9Y4X4 402 aa8.78□□□□□ -1
HPS4-202ENST00000398145 PRADC1Q9BSG0 188 aa8.78□□□□□ -1
HPS4-202ENST00000398145 TOMM7Q9P0U1 55 aa8.78□□□□□ -1
HPS4-202ENST00000398145 TRBV7-9A0A0J9YWB2 115 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 TEX48A0A1B0GUV7 120 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 TMEM219Q86XT9 240 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 ATP6V0BQ99437 205 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 SMIM2Q9BVW6 85 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 LHBP01229 141 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 BRWD1-AS2P59051 145 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 C12orf74Q32Q52 190 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 TRGV11A0A075B6L2 103 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 EFNA4P52798 201 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 LINC01587Q99440 93 aa8.77□□□□□ -1.01
HPS4-202ENST00000398145 LY6HO94772 140 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 TRBV25-1A0A075B6N4 114 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 PROP1O75360 226 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 EGR2P11161 476 aaPredicted RBP8.76□□□□□ -1.01
HPS4-202ENST00000398145 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 C8orf31Q8N9H6 132 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 TRAV26-2A0A0B4J265 109 aa8.76□□□□□ -1.01
HPS4-202ENST00000398145 C22orf46C9J442 243 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms