RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 M0R2Z0 102 aa18.51■□□□□ 0.55
U2AF1-203ENST00000398137 RXFP4Q8TDU9 374 aa18.51■□□□□ 0.55
U2AF1-203ENST00000398137 A0A1W2PRE2 83 aa18.5■□□□□ 0.55
U2AF1-203ENST00000398137 DIRC3C9JPN6 131 aa18.5■□□□□ 0.55
U2AF1-203ENST00000398137 SPINK13Q1W4C9 94 aa18.5■□□□□ 0.55
U2AF1-203ENST00000398137 VGLL1Q99990 258 aa18.5■□□□□ 0.55
U2AF1-203ENST00000398137 C1QTNF4Q9BXJ3 329 aa18.5■□□□□ 0.55
U2AF1-203ENST00000398137 FAM74A7A6NL05 159 aa18.49■□□□□ 0.55
U2AF1-203ENST00000398137 SPRY2O43597 315 aa18.49■□□□□ 0.55
U2AF1-203ENST00000398137 SUMO1P63165 101 aaKnown RBP18.49■□□□□ 0.55
U2AF1-203ENST00000398137 C5orf17Q8NAS9 161 aa18.49■□□□□ 0.55
U2AF1-203ENST00000398137 RNF183Q96D59 192 aa18.49■□□□□ 0.55
U2AF1-203ENST00000398137 TRAV1-1A0A0B4J248 108 aa18.48■□□□□ 0.55
U2AF1-203ENST00000398137 CT45A10P0DMU9 189 aa18.48■□□□□ 0.55
U2AF1-203ENST00000398137 GOLT1AQ6ZVE7 132 aa18.48■□□□□ 0.55
U2AF1-203ENST00000398137 AGPAT4-IT1Q9H0P7 198 aa18.48■□□□□ 0.55
U2AF1-203ENST00000398137 TP53TG1Q9Y2A0 90 aa18.48■□□□□ 0.55
U2AF1-203ENST00000398137 CCL20P78556 96 aa18.47■□□□□ 0.55
U2AF1-203ENST00000398137 C9orf47Q6ZRZ4 202 aa18.47■□□□□ 0.55
U2AF1-203ENST00000398137 CSNK1G2-AS1Q8NCQ2 148 aa18.47■□□□□ 0.55
U2AF1-203ENST00000398137 ALMS1Q8TCU4 4167 aa18.47■□□□□ 0.55
U2AF1-203ENST00000398137 EPPK1P58107 5090 aaKnown RBP18.46■□□□□ 0.55
U2AF1-203ENST00000398137 RBAKDNA6NC62 111 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 PAGE4O60829 102 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 HBE1P02100 147 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 TMEM78Q5T7P6 136 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 CST9LP1Q5W188 147 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 Q8TAT8 98 aa18.46■□□□□ 0.55
U2AF1-203ENST00000398137 TRAV12-2A0A075B6T6 113 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 TEX46H3BTG2 121 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 IFNA7P01567 189 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 AMBPP02760 352 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 ARL6IP6Q8N6S5 226 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 LINC00477Q96M19 166 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 ODF3Q96PU9 254 aa18.45■□□□□ 0.54
U2AF1-203ENST00000398137 J3KRW8 73 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 TCRAP04437 139 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 LEPP41159 167 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 IL17DQ8TAD2 202 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 GNG13Q9P2W3 67 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 EPDR1Q9UM22 224 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 ARL2-SNX15V9GYD0 113 aa18.44■□□□□ 0.54
U2AF1-203ENST00000398137 CRXO43186 299 aaPredicted RBP18.43■□□□□ 0.54
U2AF1-203ENST00000398137 INSP01308 110 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 TSPOP30536 169 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 CDKN1BP46527 198 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 ATP5G3P48201 142 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 PPT1P50897 306 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 OR11H2Q8NH07 326 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 IGF2BP2-AS1Q96M15 143 aa18.43■□□□□ 0.54
U2AF1-203ENST00000398137 TRAV8-1A0A0A6YYK1 113 aa18.42■□□□□ 0.54
U2AF1-203ENST00000398137 ZNF138P52744 262 aa18.42■□□□□ 0.54
U2AF1-203ENST00000398137 BLOC1S1P78537 153 aa18.42■□□□□ 0.54
U2AF1-203ENST00000398137 KIR3DS1Q14943 382 aa18.42■□□□□ 0.54
U2AF1-203ENST00000398137 NKX6-2Q9C056 277 aaPredicted RBP18.42■□□□□ 0.54
U2AF1-203ENST00000398137 ZNF492Q9P255 531 aa18.42■□□□□ 0.54
U2AF1-203ENST00000398137 IGHV3OR16-12A0A075B7B8 117 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 TEX261Q6UWH6 196 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 CYB561D1Q8N8Q1 229 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 RARRES2Q99969 163 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 ATG101Q9BSB4 218 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 MANBALQ9NQG1 85 aa18.41■□□□□ 0.54
U2AF1-203ENST00000398137 A0A0J9YWU9 116 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 SERTM2A0A1B0GWG4 89 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 PEX7O00628 323 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 FAM19A4Q96LR4 140 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 SGK494Q96LW2 274 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 GOLT1BQ9Y3E0 138 aa18.4■□□□□ 0.54
U2AF1-203ENST00000398137 K7EQM0 130 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 RBMY1A1P0DJD3 496 aaKnown RBP18.39■□□□□ 0.53
U2AF1-203ENST00000398137 RBMY1CP0DJD4 496 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 RBMY1FQ15415 496 aaKnown RBP18.39■□□□□ 0.53
U2AF1-203ENST00000398137 GFI1BQ5VTD9 330 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 CCDC28AQ8IWP9 274 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 C1orf158Q8N1D5 194 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 ZNF680Q8NEM1 530 aa18.39■□□□□ 0.53
U2AF1-203ENST00000398137 ZNF705AQ6ZN79 300 aaPredicted RBP18.38■□□□□ 0.53
U2AF1-203ENST00000398137 X6R8D5 127 aa18.38■□□□□ 0.53
U2AF1-203ENST00000398137 C11orf94C9JXX5 98 aa18.37■□□□□ 0.53
U2AF1-203ENST00000398137 CRISP2P16562 243 aa18.37■□□□□ 0.53
U2AF1-203ENST00000398137 ZFAND2AQ8N6M9 145 aa18.37■□□□□ 0.53
U2AF1-203ENST00000398137 TMEM208Q9BTX3 173 aa18.37■□□□□ 0.53
U2AF1-203ENST00000398137 TRAV34A0A0B4J273 112 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 KLLNB2CW77 178 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 IFNA1P01562 189 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 BTN1A1Q13410 526 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 PRR9Q5T870 116 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 TMEM75Q8N9X5 138 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 HIST1H2BAQ96A08 127 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 LINC00479Q96M42 142 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 TCEAL7Q9BRU2 100 aa18.36■□□□□ 0.53
U2AF1-203ENST00000398137 C7orf71A4D174 169 aa18.35■□□□□ 0.53
U2AF1-203ENST00000398137 IGLV2-11P01706 119 aa18.35■□□□□ 0.53
U2AF1-203ENST00000398137 PCNPQ8WW12 178 aaKnown RBP18.35■□□□□ 0.53
U2AF1-203ENST00000398137 TRAV12-3A0A0B4J271 114 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 TRBV7-9A0A0J9YWB2 115 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 SCO2A0A1W2PP80 73 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 F6UZH7 168 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 GPX1P07203 203 aa18.34■□□□□ 0.53
U2AF1-203ENST00000398137 BCL2P10415 239 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 271.6 ms