RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 VAMP3Q15836 100 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 GCSAMLQ5JQS6 135 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 ASPHD1Q5U4P2 390 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TCF24Q7RTU0 167 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 DCHS2Q6V1P9 2916 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 IGHV4-61A0A0C4DH41 118 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 TSPOP30536 169 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 ATP5G2Q06055 141 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 PSMG3-AS1Q96PY0 264 aa4.57□□□□□ -1.68
PTPRD-206ENST00000397617 FCN1O00602 326 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 CACNG7P62955 275 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 PRR27Q6MZM9 219 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 PIP4P2Q8N4L2 257 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 PSG8Q9UQ74 426 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 M0R381 172 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 GSX1Q9H4S2 264 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-206ENST00000397617 BAHCC1Q9P281 2608 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF138P52744 262 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 TRAPPC1Q9Y5R8 145 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 LEMD1Q68G75 181 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 BOD1L2Q8IYS8 172 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 TMEM191AQ9H0A3 160 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 UBTD1Q9HAC8 227 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 NXT2Q9NPJ8 142 aaKnown RBP4.56□□□□□ -1.68
PTPRD-206ENST00000397617 LRBAP50851 2863 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 SCGB1A1P11684 91 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 CFHR3Q02985 330 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 Q6ZN92 141 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 DIRC3C9JPN6 131 aa4.56□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF256Q9Y2P7 627 aaPredicted RBP4.56□□□□□ -1.68
PTPRD-206ENST00000397617 ZNHIT1O43257 154 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 DUSP14O95147 198 aaKnown RBP4.55□□□□□ -1.68
PTPRD-206ENST00000397617 KIR3DS1Q14943 382 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 UTF1Q5T230 341 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 MRPL36Q9P0J6 103 aaKnown RBP4.55□□□□□ -1.68
PTPRD-206ENST00000397617 SMPXQ9UHP9 88 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 Q56UQ5 140 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 GBGT1Q8N5D6 347 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 NEU1Q99519 415 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 CRYBA4P53673 196 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 LINC00205P59089 165 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 CDSNQ15517 529 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 EDA2RQ9HAV5 297 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 TPSG1Q9NRR2 321 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 CR1P17927 2039 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 F5H697 171 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 M0R2Z0 102 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 IGLV2-11P01706 119 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 TMEM78Q5T7P6 136 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 OR10AG1Q8NH19 301 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 GSN-AS1Q9NRJ2 163 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 IGHV4OR15-8A0A075B7B6 117 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 A0A087WW49 117 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 DLX1P56177 255 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 AP5S1Q9NUS5 200 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 LYZP61626 148 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 GPX1P07203 203 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 IER3P46695 156 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 DEFB113Q30KQ7 82 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 DYNLRB2Q8TF09 96 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 UQCR10Q9UDW1 63 aa4.55□□□□□ -1.68
PTPRD-206ENST00000397617 ATP6V0E1O15342 81 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 IGLC6P0CF74 106 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 EGR2P11161 476 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 DIAPH2-AS1Q14236 149 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 KLF17Q5JT82 389 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 AMN1Q8IY45 258 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 HILPDAQ9Y5L2 63 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 NUTF2P61970 127 aaKnown RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 CIRBPQ14011 172 aaKnown RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 MRPL54Q6P161 138 aaKnown RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 TMEM136Q6ZRR5 245 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 SYT8Q8NBV8 401 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 SNURFLB1AK76 121 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 TFF1P04155 84 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 PRSS3P2Q8NHM4 247 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 KIR2DL5BA0A0G2JN68 375 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 KIR2DL5BA0A0G2JPC4 375 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 LYNX1G3V0Z9 82 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 SNAI2O43623 268 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 NXPH4O95158 308 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 LYNX1P0DP58 116 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 Q5PR19 223 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 LHFPL4Q7Z7J7 247 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 KIR2DL5AQ8N109 375 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 NUDT10Q8NFP7 164 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 GLMPQ8WWB7 406 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 NUDT11Q96G61 164 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 LOC400499M0QZD8 3231 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 ASH1LQ9NR48 2969 aaKnown RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 HIGD1CA8MV81 97 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 IGHV3-7P01780 117 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 PSMB8P28062 276 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 HINT1P49773 126 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 ZNF324O75467 553 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-206ENST00000397617 C20orf24Q9BUV8 137 aa4.54□□□□□ -1.68
PTPRD-206ENST00000397617 OR2K2Q8NGT1 345 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 ORMDL3Q8N138 153 aa4.53□□□□□ -1.68
PTPRD-206ENST00000397617 URGCP-MRPS24S4R325 110 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms